Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm6450-201ENSMUST00000200896 574 ntBASIC10.57□□□□□ -0.72
Chd6A3KFM7 Gm18460-201ENSMUST00000208088 464 ntBASIC10.57□□□□□ -0.72
Chd6A3KFM7 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.57□□□□□ -0.72
Chd6A3KFM7 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 CT030704.2-201ENSMUST00000228887 494 ntBASIC10.57□□□□□ -0.72
Chd6A3KFM7 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.57□□□□□ -0.72
Chd6A3KFM7 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Chd6A3KFM7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.56□□□□□ -0.72
Chd6A3KFM7 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.56□□□□□ -0.72
Chd6A3KFM7 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Gm16202-201ENSMUST00000117532 544 ntBASIC10.56□□□□□ -0.72
Chd6A3KFM7 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.56□□□□□ -0.72
Chd6A3KFM7 Gm45504-201ENSMUST00000211407 2107 ntBASIC10.56□□□□□ -0.72
Chd6A3KFM7 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.56□□□□□ -0.72
Chd6A3KFM7 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd6A3KFM7 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.55□□□□□ -0.72
Chd6A3KFM7 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.55□□□□□ -0.72
Chd6A3KFM7 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.55□□□□□ -0.72
Chd6A3KFM7 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC10.55□□□□□ -0.72
Chd6A3KFM7 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Daam2-202ENSMUST00000224595 1926 ntBASIC10.55□□□□□ -0.72
Chd6A3KFM7 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.55□□□□□ -0.72
Chd6A3KFM7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Gm4726-201ENSMUST00000135604 736 ntBASIC10.55□□□□□ -0.72
Chd6A3KFM7 Gm6019-201ENSMUST00000148369 736 ntBASIC10.55□□□□□ -0.72
Chd6A3KFM7 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC10.55□□□□□ -0.72
Chd6A3KFM7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.55□□□□□ -0.72
Chd6A3KFM7 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Gm26013-201ENSMUST00000104404 119 ntBASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms