Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm11978-201ENSMUST00000122315 466 ntBASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm13316-201ENSMUST00000140537 691 ntBASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3854A0A1B0GSS6 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Gm3854A0A1B0GSS6 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Gm3854A0A1B0GSS6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Gm3854A0A1B0GSS6 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Gm3854A0A1B0GSS6 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Mir5132-201ENSMUST00000175166 71 ntBASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3854A0A1B0GSS6 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.13□□□□□ -0.31
Gm3854A0A1B0GSS6 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm3854A0A1B0GSS6 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm3854A0A1B0GSS6 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm3854A0A1B0GSS6 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm3854A0A1B0GSS6 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Gm3854A0A1B0GSS6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Gm3854A0A1B0GSS6 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm3854A0A1B0GSS6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm3854A0A1B0GSS6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Gm3854A0A1B0GSS6 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms