Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Gm15376-201ENSMUST00000122258 783 ntBASIC10.81□□□□□ -0.68
Trav18A0A075B656 Gm15487-201ENSMUST00000122373 465 ntBASIC10.81□□□□□ -0.68
Trav18A0A075B656 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Gm43094-201ENSMUST00000196549 921 ntBASIC10.81□□□□□ -0.68
Trav18A0A075B656 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Gm20445-201ENSMUST00000061905 565 ntBASIC10.81□□□□□ -0.68
Trav18A0A075B656 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Gm24447-201ENSMUST00000083977 338 ntBASIC10.81□□□□□ -0.68
Trav18A0A075B656 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.81□□□□□ -0.68
Trav18A0A075B656 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.8□□□□□ -0.68
Trav18A0A075B656 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Gm12151-201ENSMUST00000121374 290 ntBASIC10.8□□□□□ -0.68
Trav18A0A075B656 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.8□□□□□ -0.68
Trav18A0A075B656 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Gm21854-201ENSMUST00000179901 471 ntBASIC10.8□□□□□ -0.68
Trav18A0A075B656 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Gm27306-201ENSMUST00000183970 107 ntBASIC10.8□□□□□ -0.68
Trav18A0A075B656 Gm27989-201ENSMUST00000184721 107 ntBASIC10.8□□□□□ -0.68
Trav18A0A075B656 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.8□□□□□ -0.68
Trav18A0A075B656 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC10.8□□□□□ -0.68
Trav18A0A075B656 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.8□□□□□ -0.68
Trav18A0A075B656 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Trav18A0A075B656 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms