Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Gm20445-201ENSMUST00000061905 565 ntBASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Gm5867-201ENSMUST00000063197 592 ntBASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
Trav5-4A0A075B652 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Gm12151-201ENSMUST00000121374 290 ntBASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Gm44872-201ENSMUST00000207864 420 ntBASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.06□□□□□ -0.64
Trav5-4A0A075B652 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms