Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clcn2Q9R0A1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clcn2Q9R0A1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clcn2Q9R0A1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.73■■□□□ 1.07
Clcn2Q9R0A1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Clcn2Q9R0A1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Clcn2Q9R0A1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clcn2Q9R0A1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clcn2Q9R0A1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clcn2Q9R0A1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clcn2Q9R0A1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.72■■□□□ 1.07
Clcn2Q9R0A1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clcn2Q9R0A1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clcn2Q9R0A1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.71■■□□□ 1.07
Clcn2Q9R0A1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Clcn2Q9R0A1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.7■■□□□ 1.06
Clcn2Q9R0A1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Clcn2Q9R0A1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clcn2Q9R0A1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clcn2Q9R0A1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clcn2Q9R0A1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clcn2Q9R0A1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clcn2Q9R0A1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clcn2Q9R0A1 Gm10420-201ENSMUST00000121713 882 ntBASIC21.69■■□□□ 1.06
Clcn2Q9R0A1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Clcn2Q9R0A1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Clcn2Q9R0A1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clcn2Q9R0A1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Clcn2Q9R0A1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.68■■□□□ 1.06
Clcn2Q9R0A1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Clcn2Q9R0A1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clcn2Q9R0A1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.68■■□□□ 1.06
Clcn2Q9R0A1 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.68■■□□□ 1.06
Clcn2Q9R0A1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.68■■□□□ 1.06
Clcn2Q9R0A1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clcn2Q9R0A1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clcn2Q9R0A1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.67■■□□□ 1.06
Clcn2Q9R0A1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clcn2Q9R0A1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clcn2Q9R0A1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clcn2Q9R0A1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Clcn2Q9R0A1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clcn2Q9R0A1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.66■■□□□ 1.06
Clcn2Q9R0A1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clcn2Q9R0A1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Clcn2Q9R0A1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn2Q9R0A1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn2Q9R0A1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn2Q9R0A1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn2Q9R0A1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn2Q9R0A1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn2Q9R0A1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Clcn2Q9R0A1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn2Q9R0A1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn2Q9R0A1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.64■■□□□ 1.06
Clcn2Q9R0A1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clcn2Q9R0A1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Clcn2Q9R0A1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Clcn2Q9R0A1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clcn2Q9R0A1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clcn2Q9R0A1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Clcn2Q9R0A1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.63■■□□□ 1.05
Clcn2Q9R0A1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clcn2Q9R0A1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clcn2Q9R0A1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Clcn2Q9R0A1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Clcn2Q9R0A1 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.62■■□□□ 1.05
Clcn2Q9R0A1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Clcn2Q9R0A1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Clcn2Q9R0A1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Clcn2Q9R0A1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
Clcn2Q9R0A1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Clcn2Q9R0A1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
Clcn2Q9R0A1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Clcn2Q9R0A1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Clcn2Q9R0A1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Clcn2Q9R0A1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Clcn2Q9R0A1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Clcn2Q9R0A1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Clcn2Q9R0A1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Clcn2Q9R0A1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Clcn2Q9R0A1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Clcn2Q9R0A1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Clcn2Q9R0A1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Clcn2Q9R0A1 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.6■■□□□ 1.05
Clcn2Q9R0A1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clcn2Q9R0A1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clcn2Q9R0A1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clcn2Q9R0A1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.59■■□□□ 1.05
Clcn2Q9R0A1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Clcn2Q9R0A1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Clcn2Q9R0A1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clcn2Q9R0A1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clcn2Q9R0A1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clcn2Q9R0A1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clcn2Q9R0A1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Clcn2Q9R0A1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Clcn2Q9R0A1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Clcn2Q9R0A1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Clcn2Q9R0A1 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms