Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trim39Q9ESN2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim39Q9ESN2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim39Q9ESN2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.69■□□□□ 0.74
Trim39Q9ESN2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trim39Q9ESN2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim39Q9ESN2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim39Q9ESN2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim39Q9ESN2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim39Q9ESN2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim39Q9ESN2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim39Q9ESN2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Trim39Q9ESN2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trim39Q9ESN2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim39Q9ESN2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim39Q9ESN2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim39Q9ESN2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim39Q9ESN2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Trim39Q9ESN2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim39Q9ESN2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Trim39Q9ESN2 Gm14523-201ENSMUST00000117260 558 ntBASIC19.66■□□□□ 0.74
Trim39Q9ESN2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim39Q9ESN2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.66■□□□□ 0.74
Trim39Q9ESN2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim39Q9ESN2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.66■□□□□ 0.74
Trim39Q9ESN2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim39Q9ESN2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim39Q9ESN2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim39Q9ESN2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim39Q9ESN2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim39Q9ESN2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim39Q9ESN2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim39Q9ESN2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim39Q9ESN2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim39Q9ESN2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim39Q9ESN2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim39Q9ESN2 Gm7332-201ENSMUST00000118351 454 ntBASIC19.64■□□□□ 0.73
Trim39Q9ESN2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim39Q9ESN2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim39Q9ESN2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim39Q9ESN2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Trim39Q9ESN2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim39Q9ESN2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim39Q9ESN2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim39Q9ESN2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim39Q9ESN2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim39Q9ESN2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trim39Q9ESN2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.62■□□□□ 0.73
Trim39Q9ESN2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim39Q9ESN2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.62■□□□□ 0.73
Trim39Q9ESN2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim39Q9ESN2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim39Q9ESN2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim39Q9ESN2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim39Q9ESN2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.61■□□□□ 0.73
Trim39Q9ESN2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim39Q9ESN2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Trim39Q9ESN2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim39Q9ESN2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim39Q9ESN2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim39Q9ESN2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.61■□□□□ 0.73
Trim39Q9ESN2 Gm12366-201ENSMUST00000121722 873 ntBASIC19.61■□□□□ 0.73
Trim39Q9ESN2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim39Q9ESN2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.61■□□□□ 0.73
Trim39Q9ESN2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.61■□□□□ 0.73
Trim39Q9ESN2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.61■□□□□ 0.73
Trim39Q9ESN2 Gm5786-201ENSMUST00000085368 882 ntBASIC19.61■□□□□ 0.73
Trim39Q9ESN2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Trim39Q9ESN2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.61■□□□□ 0.73
Trim39Q9ESN2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim39Q9ESN2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim39Q9ESN2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim39Q9ESN2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim39Q9ESN2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim39Q9ESN2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim39Q9ESN2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim39Q9ESN2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim39Q9ESN2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.6■□□□□ 0.73
Trim39Q9ESN2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim39Q9ESN2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim39Q9ESN2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim39Q9ESN2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim39Q9ESN2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim39Q9ESN2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim39Q9ESN2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim39Q9ESN2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trim39Q9ESN2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Trim39Q9ESN2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim39Q9ESN2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim39Q9ESN2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim39Q9ESN2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim39Q9ESN2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim39Q9ESN2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim39Q9ESN2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.58■□□□□ 0.72
Trim39Q9ESN2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim39Q9ESN2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim39Q9ESN2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim39Q9ESN2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim39Q9ESN2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim39Q9ESN2 Iqck-206ENSMUST00000208658 2891 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms