Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ube4bQ9ES00 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.36■□□□□ 0.85
Ube4bQ9ES00 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ube4bQ9ES00 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ube4bQ9ES00 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Ube4bQ9ES00 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Ube4bQ9ES00 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.36■□□□□ 0.85
Ube4bQ9ES00 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Ube4bQ9ES00 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ube4bQ9ES00 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
Ube4bQ9ES00 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ube4bQ9ES00 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ube4bQ9ES00 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.35■□□□□ 0.85
Ube4bQ9ES00 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ube4bQ9ES00 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ube4bQ9ES00 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ube4bQ9ES00 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ube4bQ9ES00 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ube4bQ9ES00 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Ube4bQ9ES00 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.33■□□□□ 0.85
Ube4bQ9ES00 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Ube4bQ9ES00 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ube4bQ9ES00 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ube4bQ9ES00 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ube4bQ9ES00 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ube4bQ9ES00 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ube4bQ9ES00 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4bQ9ES00 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4bQ9ES00 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4bQ9ES00 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4bQ9ES00 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4bQ9ES00 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4bQ9ES00 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ube4bQ9ES00 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4bQ9ES00 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ube4bQ9ES00 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ube4bQ9ES00 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ube4bQ9ES00 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ube4bQ9ES00 Gm8503-201ENSMUST00000118131 455 ntBASIC20.3■□□□□ 0.84
Ube4bQ9ES00 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ube4bQ9ES00 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ube4bQ9ES00 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ube4bQ9ES00 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ube4bQ9ES00 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ube4bQ9ES00 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ube4bQ9ES00 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.29■□□□□ 0.84
Ube4bQ9ES00 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ube4bQ9ES00 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ube4bQ9ES00 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ube4bQ9ES00 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ube4bQ9ES00 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ube4bQ9ES00 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ube4bQ9ES00 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ube4bQ9ES00 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ube4bQ9ES00 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ube4bQ9ES00 Golph3-202ENSMUST00000226517 2359 ntBASIC20.26■□□□□ 0.83
Ube4bQ9ES00 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ube4bQ9ES00 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ube4bQ9ES00 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.25■□□□□ 0.83
Ube4bQ9ES00 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ube4bQ9ES00 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ube4bQ9ES00 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ube4bQ9ES00 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ube4bQ9ES00 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ube4bQ9ES00 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ube4bQ9ES00 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ube4bQ9ES00 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.24■□□□□ 0.83
Ube4bQ9ES00 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ube4bQ9ES00 Gm37136-201ENSMUST00000194368 194 ntBASIC20.24■□□□□ 0.83
Ube4bQ9ES00 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ube4bQ9ES00 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ube4bQ9ES00 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ube4bQ9ES00 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Ube4bQ9ES00 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Ube4bQ9ES00 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ube4bQ9ES00 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ube4bQ9ES00 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ube4bQ9ES00 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ube4bQ9ES00 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Ube4bQ9ES00 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ube4bQ9ES00 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ube4bQ9ES00 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.22■□□□□ 0.83
Ube4bQ9ES00 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ube4bQ9ES00 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ube4bQ9ES00 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ube4bQ9ES00 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ube4bQ9ES00 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ube4bQ9ES00 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ube4bQ9ES00 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ube4bQ9ES00 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ube4bQ9ES00 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ube4bQ9ES00 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ube4bQ9ES00 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube4bQ9ES00 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ube4bQ9ES00 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube4bQ9ES00 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube4bQ9ES00 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube4bQ9ES00 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube4bQ9ES00 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ube4bQ9ES00 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms