Protein–RNA interactions for Protein: Q9DC28

Csnk1d, Casein kinase I isoform delta, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1dQ9DC28 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Csnk1dQ9DC28 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Csnk1dQ9DC28 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Csnk1dQ9DC28 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Csnk1dQ9DC28 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.31■■□□□ 1
Csnk1dQ9DC28 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Csnk1dQ9DC28 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.31■■□□□ 1
Csnk1dQ9DC28 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.31■■□□□ 1
Csnk1dQ9DC28 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.31■■□□□ 1
Csnk1dQ9DC28 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Csnk1dQ9DC28 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Csnk1dQ9DC28 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Csnk1dQ9DC28 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Csnk1dQ9DC28 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Csnk1dQ9DC28 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.29■■□□□ 1
Csnk1dQ9DC28 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Csnk1dQ9DC28 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Csnk1dQ9DC28 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.29■■□□□ 1
Csnk1dQ9DC28 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.29■■□□□ 1
Csnk1dQ9DC28 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Csnk1dQ9DC28 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Csnk1dQ9DC28 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.29■■□□□ 1
Csnk1dQ9DC28 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.29■■□□□ 1
Csnk1dQ9DC28 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Csnk1dQ9DC28 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.28■■□□□ 1
Csnk1dQ9DC28 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Csnk1dQ9DC28 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.28■■□□□ 1
Csnk1dQ9DC28 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.28■■□□□ 1
Csnk1dQ9DC28 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.28■■□□□ 1
Csnk1dQ9DC28 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.28■■□□□ 1
Csnk1dQ9DC28 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Csnk1dQ9DC28 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Csnk1dQ9DC28 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.27■■□□□ 1
Csnk1dQ9DC28 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Csnk1dQ9DC28 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Csnk1dQ9DC28 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.27■■□□□ 1
Csnk1dQ9DC28 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.27■■□□□ 1
Csnk1dQ9DC28 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Csnk1dQ9DC28 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Csnk1dQ9DC28 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Csnk1dQ9DC28 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.26■□□□□ 0.99
Csnk1dQ9DC28 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.26■□□□□ 0.99
Csnk1dQ9DC28 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Csnk1dQ9DC28 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Csnk1dQ9DC28 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Csnk1dQ9DC28 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Csnk1dQ9DC28 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Csnk1dQ9DC28 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Csnk1dQ9DC28 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Csnk1dQ9DC28 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Csnk1dQ9DC28 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Csnk1dQ9DC28 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Csnk1dQ9DC28 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Csnk1dQ9DC28 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Csnk1dQ9DC28 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Csnk1dQ9DC28 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.24■□□□□ 0.99
Csnk1dQ9DC28 Gm10399-202ENSMUST00000202768 748 ntBASIC21.24■□□□□ 0.99
Csnk1dQ9DC28 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.24■□□□□ 0.99
Csnk1dQ9DC28 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.24■□□□□ 0.99
Csnk1dQ9DC28 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.24■□□□□ 0.99
Csnk1dQ9DC28 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Csnk1dQ9DC28 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Csnk1dQ9DC28 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Csnk1dQ9DC28 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Csnk1dQ9DC28 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.23■□□□□ 0.99
Csnk1dQ9DC28 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Csnk1dQ9DC28 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.23■□□□□ 0.99
Csnk1dQ9DC28 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Csnk1dQ9DC28 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Csnk1dQ9DC28 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Csnk1dQ9DC28 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Csnk1dQ9DC28 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.23■□□□□ 0.99
Csnk1dQ9DC28 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Csnk1dQ9DC28 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Csnk1dQ9DC28 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Csnk1dQ9DC28 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.22■□□□□ 0.99
Csnk1dQ9DC28 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Csnk1dQ9DC28 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.21■□□□□ 0.99
Csnk1dQ9DC28 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Csnk1dQ9DC28 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Csnk1dQ9DC28 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Csnk1dQ9DC28 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Csnk1dQ9DC28 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.2■□□□□ 0.98
Csnk1dQ9DC28 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.2■□□□□ 0.98
Csnk1dQ9DC28 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Csnk1dQ9DC28 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Csnk1dQ9DC28 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Csnk1dQ9DC28 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Csnk1dQ9DC28 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Csnk1dQ9DC28 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.19■□□□□ 0.98
Csnk1dQ9DC28 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Csnk1dQ9DC28 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Csnk1dQ9DC28 Gm45102-201ENSMUST00000207427 857 ntBASIC21.19■□□□□ 0.98
Csnk1dQ9DC28 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Csnk1dQ9DC28 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Csnk1dQ9DC28 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.19■□□□□ 0.98
Csnk1dQ9DC28 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Csnk1dQ9DC28 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Csnk1dQ9DC28 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Csnk1dQ9DC28 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms