Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim16Q99PP9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim16Q99PP9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Trim16Q99PP9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Trim16Q99PP9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim16Q99PP9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim16Q99PP9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim16Q99PP9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim16Q99PP9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim16Q99PP9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim16Q99PP9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Trim16Q99PP9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim16Q99PP9 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.65■□□□□ 0.9
Trim16Q99PP9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim16Q99PP9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim16Q99PP9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim16Q99PP9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim16Q99PP9 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.64■□□□□ 0.9
Trim16Q99PP9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim16Q99PP9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim16Q99PP9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim16Q99PP9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim16Q99PP9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Trim16Q99PP9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim16Q99PP9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim16Q99PP9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim16Q99PP9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Trim16Q99PP9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Trim16Q99PP9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim16Q99PP9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Trim16Q99PP9 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.63■□□□□ 0.89
Trim16Q99PP9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Trim16Q99PP9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.63■□□□□ 0.89
Trim16Q99PP9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Trim16Q99PP9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim16Q99PP9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.62■□□□□ 0.89
Trim16Q99PP9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim16Q99PP9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim16Q99PP9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim16Q99PP9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim16Q99PP9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim16Q99PP9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.62■□□□□ 0.89
Trim16Q99PP9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim16Q99PP9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim16Q99PP9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim16Q99PP9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim16Q99PP9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Trim16Q99PP9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim16Q99PP9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim16Q99PP9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim16Q99PP9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim16Q99PP9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim16Q99PP9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim16Q99PP9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim16Q99PP9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim16Q99PP9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim16Q99PP9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim16Q99PP9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim16Q99PP9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim16Q99PP9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim16Q99PP9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim16Q99PP9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim16Q99PP9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Trim16Q99PP9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.59■□□□□ 0.89
Trim16Q99PP9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Trim16Q99PP9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim16Q99PP9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Trim16Q99PP9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim16Q99PP9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim16Q99PP9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim16Q99PP9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim16Q99PP9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim16Q99PP9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim16Q99PP9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim16Q99PP9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.57■□□□□ 0.88
Trim16Q99PP9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.57■□□□□ 0.88
Trim16Q99PP9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Trim16Q99PP9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim16Q99PP9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim16Q99PP9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim16Q99PP9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Trim16Q99PP9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim16Q99PP9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Trim16Q99PP9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim16Q99PP9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim16Q99PP9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim16Q99PP9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.56■□□□□ 0.88
Trim16Q99PP9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim16Q99PP9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trim16Q99PP9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim16Q99PP9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim16Q99PP9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.55■□□□□ 0.88
Trim16Q99PP9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim16Q99PP9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim16Q99PP9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim16Q99PP9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim16Q99PP9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim16Q99PP9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim16Q99PP9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim16Q99PP9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms