Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 AC140930.3-201ENSMUST00000222935 274 ntBASIC26.55■■□□□ 1.84
Trim34aQ99PP6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trim34aQ99PP6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Trim34aQ99PP6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trim34aQ99PP6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trim34aQ99PP6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trim34aQ99PP6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trim34aQ99PP6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trim34aQ99PP6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC26.53■■□□□ 1.84
Trim34aQ99PP6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trim34aQ99PP6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Trim34aQ99PP6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Trim34aQ99PP6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Trim34aQ99PP6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC26.52■■□□□ 1.84
Trim34aQ99PP6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Trim34aQ99PP6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim34aQ99PP6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim34aQ99PP6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim34aQ99PP6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim34aQ99PP6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC26.51■■□□□ 1.83
Trim34aQ99PP6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim34aQ99PP6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim34aQ99PP6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trim34aQ99PP6 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Trim34aQ99PP6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC26.5■■□□□ 1.83
Trim34aQ99PP6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trim34aQ99PP6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC26.5■■□□□ 1.83
Trim34aQ99PP6 Appbp2os-202ENSMUST00000206972 447 ntBASIC26.49■■□□□ 1.83
Trim34aQ99PP6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Trim34aQ99PP6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Trim34aQ99PP6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim34aQ99PP6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Trim34aQ99PP6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC26.48■■□□□ 1.83
Trim34aQ99PP6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC26.48■■□□□ 1.83
Trim34aQ99PP6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim34aQ99PP6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC26.47■■□□□ 1.83
Trim34aQ99PP6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trim34aQ99PP6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trim34aQ99PP6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC26.47■■□□□ 1.83
Trim34aQ99PP6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC26.47■■□□□ 1.83
Trim34aQ99PP6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC26.47■■□□□ 1.83
Trim34aQ99PP6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
Trim34aQ99PP6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trim34aQ99PP6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trim34aQ99PP6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim34aQ99PP6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim34aQ99PP6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim34aQ99PP6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC26.46■■□□□ 1.83
Trim34aQ99PP6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim34aQ99PP6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim34aQ99PP6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim34aQ99PP6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.83
Trim34aQ99PP6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC26.45■■□□□ 1.82
Trim34aQ99PP6 Gm12821-201ENSMUST00000120022 600 ntBASIC26.45■■□□□ 1.82
Trim34aQ99PP6 Golgb1-201ENSMUST00000023534 498 ntBASIC26.45■■□□□ 1.82
Trim34aQ99PP6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Trim34aQ99PP6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Trim34aQ99PP6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Trim34aQ99PP6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Trim34aQ99PP6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trim34aQ99PP6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC26.44■■□□□ 1.82
Trim34aQ99PP6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC26.44■■□□□ 1.82
Trim34aQ99PP6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trim34aQ99PP6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Trim34aQ99PP6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim34aQ99PP6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim34aQ99PP6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC26.43■■□□□ 1.82
Trim34aQ99PP6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
Trim34aQ99PP6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim34aQ99PP6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Trim34aQ99PP6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Trim34aQ99PP6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Trim34aQ99PP6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Trim34aQ99PP6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Trim34aQ99PP6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Trim34aQ99PP6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Trim34aQ99PP6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Trim34aQ99PP6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Trim34aQ99PP6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Trim34aQ99PP6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Trim34aQ99PP6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Trim34aQ99PP6 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Trim34aQ99PP6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.81
Trim34aQ99PP6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Trim34aQ99PP6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
Trim34aQ99PP6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Trim34aQ99PP6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Trim34aQ99PP6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Trim34aQ99PP6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Trim34aQ99PP6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Trim34aQ99PP6 Gm27454-201ENSMUST00000185090 204 ntBASIC26.37■■□□□ 1.81
Trim34aQ99PP6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
Trim34aQ99PP6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Trim34aQ99PP6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trim34aQ99PP6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC26.36■■□□□ 1.81
Trim34aQ99PP6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trim34aQ99PP6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trim34aQ99PP6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Trim34aQ99PP6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Trim34aQ99PP6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms