Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Pcdh15Q99PJ1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdh15Q99PJ1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdh15Q99PJ1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdh15Q99PJ1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdh15Q99PJ1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC25.03■■□□□ 1.6
Pcdh15Q99PJ1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC25.02■■□□□ 1.6
Pcdh15Q99PJ1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC25.02■■□□□ 1.6
Pcdh15Q99PJ1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdh15Q99PJ1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdh15Q99PJ1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdh15Q99PJ1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdh15Q99PJ1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdh15Q99PJ1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdh15Q99PJ1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdh15Q99PJ1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdh15Q99PJ1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdh15Q99PJ1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdh15Q99PJ1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC25■■□□□ 1.59
Pcdh15Q99PJ1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC25■■□□□ 1.59
Pcdh15Q99PJ1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdh15Q99PJ1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25■■□□□ 1.59
Pcdh15Q99PJ1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC25■■□□□ 1.59
Pcdh15Q99PJ1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdh15Q99PJ1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdh15Q99PJ1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Pcdh15Q99PJ1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Pcdh15Q99PJ1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.99■■□□□ 1.59
Pcdh15Q99PJ1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdh15Q99PJ1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC24.98■■□□□ 1.59
Pcdh15Q99PJ1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdh15Q99PJ1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Pcdh15Q99PJ1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdh15Q99PJ1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdh15Q99PJ1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdh15Q99PJ1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Pcdh15Q99PJ1 Gm43137-201ENSMUST00000198052 594 ntBASIC24.98■■□□□ 1.59
Pcdh15Q99PJ1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdh15Q99PJ1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdh15Q99PJ1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdh15Q99PJ1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdh15Q99PJ1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC24.96■■□□□ 1.59
Pcdh15Q99PJ1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdh15Q99PJ1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdh15Q99PJ1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdh15Q99PJ1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC24.96■■□□□ 1.59
Pcdh15Q99PJ1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdh15Q99PJ1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.96■■□□□ 1.59
Pcdh15Q99PJ1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
Pcdh15Q99PJ1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
Pcdh15Q99PJ1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdh15Q99PJ1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
Pcdh15Q99PJ1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC24.95■■□□□ 1.59
Pcdh15Q99PJ1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdh15Q99PJ1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdh15Q99PJ1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdh15Q99PJ1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdh15Q99PJ1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdh15Q99PJ1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdh15Q99PJ1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdh15Q99PJ1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdh15Q99PJ1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdh15Q99PJ1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdh15Q99PJ1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC24.94■■□□□ 1.58
Pcdh15Q99PJ1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdh15Q99PJ1 Gm26571-201ENSMUST00000181399 666 ntBASIC24.93■■□□□ 1.58
Pcdh15Q99PJ1 Gm28731-201ENSMUST00000185564 1569 ntBASIC24.93■■□□□ 1.58
Pcdh15Q99PJ1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdh15Q99PJ1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdh15Q99PJ1 Gm21168-201ENSMUST00000199646 1096 ntBASIC24.92■■□□□ 1.58
Pcdh15Q99PJ1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdh15Q99PJ1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdh15Q99PJ1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdh15Q99PJ1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdh15Q99PJ1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC24.91■■□□□ 1.58
Pcdh15Q99PJ1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdh15Q99PJ1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.91■■□□□ 1.58
Pcdh15Q99PJ1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
Pcdh15Q99PJ1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdh15Q99PJ1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC24.9■■□□□ 1.58
Pcdh15Q99PJ1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdh15Q99PJ1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC24.89■■□□□ 1.58
Pcdh15Q99PJ1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Pcdh15Q99PJ1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdh15Q99PJ1 AC116713.1-201ENSMUST00000215074 430 ntBASIC24.88■■□□□ 1.57
Pcdh15Q99PJ1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdh15Q99PJ1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdh15Q99PJ1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdh15Q99PJ1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
Pcdh15Q99PJ1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC24.87■■□□□ 1.57
Pcdh15Q99PJ1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdh15Q99PJ1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdh15Q99PJ1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdh15Q99PJ1 Gm9207-201ENSMUST00000198773 1115 ntBASIC24.86■■□□□ 1.57
Pcdh15Q99PJ1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdh15Q99PJ1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdh15Q99PJ1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdh15Q99PJ1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdh15Q99PJ1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdh15Q99PJ1 Gm12251-201ENSMUST00000117893 792 ntBASIC24.85■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms