Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.65■□□□□ 0.9
Msh4Q99MT2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Msh4Q99MT2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Msh4Q99MT2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.65■□□□□ 0.9
Msh4Q99MT2 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.65■□□□□ 0.9
Msh4Q99MT2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Msh4Q99MT2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Msh4Q99MT2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Msh4Q99MT2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh4Q99MT2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh4Q99MT2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh4Q99MT2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Msh4Q99MT2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh4Q99MT2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Msh4Q99MT2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh4Q99MT2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.63■□□□□ 0.89
Msh4Q99MT2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh4Q99MT2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.63■□□□□ 0.89
Msh4Q99MT2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.63■□□□□ 0.89
Msh4Q99MT2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Msh4Q99MT2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Msh4Q99MT2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Msh4Q99MT2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.62■□□□□ 0.89
Msh4Q99MT2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.62■□□□□ 0.89
Msh4Q99MT2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Msh4Q99MT2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Msh4Q99MT2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Msh4Q99MT2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Msh4Q99MT2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Msh4Q99MT2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Msh4Q99MT2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.61■□□□□ 0.89
Msh4Q99MT2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Msh4Q99MT2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.61■□□□□ 0.89
Msh4Q99MT2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Msh4Q99MT2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Msh4Q99MT2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Msh4Q99MT2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Msh4Q99MT2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Msh4Q99MT2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Msh4Q99MT2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.59■□□□□ 0.89
Msh4Q99MT2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh4Q99MT2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Msh4Q99MT2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Msh4Q99MT2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.59■□□□□ 0.89
Msh4Q99MT2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.59■□□□□ 0.89
Msh4Q99MT2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Msh4Q99MT2 Gm45444-201ENSMUST00000211394 898 ntBASIC20.59■□□□□ 0.89
Msh4Q99MT2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Msh4Q99MT2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Msh4Q99MT2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.59■□□□□ 0.89
Msh4Q99MT2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Msh4Q99MT2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Msh4Q99MT2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Msh4Q99MT2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Msh4Q99MT2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Msh4Q99MT2 Gm13238-201ENSMUST00000117655 780 ntBASIC20.58■□□□□ 0.89
Msh4Q99MT2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Msh4Q99MT2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Msh4Q99MT2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Msh4Q99MT2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Msh4Q99MT2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Msh4Q99MT2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Msh4Q99MT2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Msh4Q99MT2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Msh4Q99MT2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Msh4Q99MT2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Msh4Q99MT2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Msh4Q99MT2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Msh4Q99MT2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Msh4Q99MT2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Msh4Q99MT2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Msh4Q99MT2 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.56■□□□□ 0.88
Msh4Q99MT2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Msh4Q99MT2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Msh4Q99MT2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Msh4Q99MT2 Gm43566-201ENSMUST00000196851 808 ntBASIC20.56■□□□□ 0.88
Msh4Q99MT2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Msh4Q99MT2 Gm5812-201ENSMUST00000061073 957 ntBASIC20.56■□□□□ 0.88
Msh4Q99MT2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Msh4Q99MT2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Msh4Q99MT2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Msh4Q99MT2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Msh4Q99MT2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Msh4Q99MT2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Msh4Q99MT2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Msh4Q99MT2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Msh4Q99MT2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Msh4Q99MT2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Msh4Q99MT2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.55■□□□□ 0.88
Msh4Q99MT2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Msh4Q99MT2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Msh4Q99MT2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Msh4Q99MT2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Msh4Q99MT2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Msh4Q99MT2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.54■□□□□ 0.88
Msh4Q99MT2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Msh4Q99MT2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Msh4Q99MT2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Msh4Q99MT2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Msh4Q99MT2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms