Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.68■□□□□ 0.9
Rab28Q99KL7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rab28Q99KL7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab28Q99KL7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rab28Q99KL7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.67■□□□□ 0.9
Rab28Q99KL7 Gm15546-201ENSMUST00000122095 826 ntBASIC20.67■□□□□ 0.9
Rab28Q99KL7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab28Q99KL7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rab28Q99KL7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab28Q99KL7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab28Q99KL7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab28Q99KL7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rab28Q99KL7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab28Q99KL7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab28Q99KL7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab28Q99KL7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab28Q99KL7 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab28Q99KL7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rab28Q99KL7 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rab28Q99KL7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rab28Q99KL7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.65■□□□□ 0.9
Rab28Q99KL7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rab28Q99KL7 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rab28Q99KL7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rab28Q99KL7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rab28Q99KL7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.64■□□□□ 0.89
Rab28Q99KL7 Gm15820-201ENSMUST00000201566 728 ntBASIC20.64■□□□□ 0.89
Rab28Q99KL7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rab28Q99KL7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rab28Q99KL7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Rab28Q99KL7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.64■□□□□ 0.89
Rab28Q99KL7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rab28Q99KL7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab28Q99KL7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab28Q99KL7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab28Q99KL7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.63■□□□□ 0.89
Rab28Q99KL7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab28Q99KL7 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.62■□□□□ 0.89
Rab28Q99KL7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab28Q99KL7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab28Q99KL7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab28Q99KL7 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.62■□□□□ 0.89
Rab28Q99KL7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab28Q99KL7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.62■□□□□ 0.89
Rab28Q99KL7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Rab28Q99KL7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.61■□□□□ 0.89
Rab28Q99KL7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.61■□□□□ 0.89
Rab28Q99KL7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rab28Q99KL7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rab28Q99KL7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rab28Q99KL7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rab28Q99KL7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.6■□□□□ 0.89
Rab28Q99KL7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rab28Q99KL7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rab28Q99KL7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab28Q99KL7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rab28Q99KL7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab28Q99KL7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rab28Q99KL7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.59■□□□□ 0.89
Rab28Q99KL7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.59■□□□□ 0.89
Rab28Q99KL7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab28Q99KL7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rab28Q99KL7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rab28Q99KL7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.58■□□□□ 0.89
Rab28Q99KL7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.58■□□□□ 0.89
Rab28Q99KL7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rab28Q99KL7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Rab28Q99KL7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rab28Q99KL7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rab28Q99KL7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rab28Q99KL7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rab28Q99KL7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rab28Q99KL7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Rab28Q99KL7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rab28Q99KL7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab28Q99KL7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab28Q99KL7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab28Q99KL7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Rab28Q99KL7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rab28Q99KL7 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.56■□□□□ 0.88
Rab28Q99KL7 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.56■□□□□ 0.88
Rab28Q99KL7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.56■□□□□ 0.88
Rab28Q99KL7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab28Q99KL7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab28Q99KL7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab28Q99KL7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab28Q99KL7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.55■□□□□ 0.88
Rab28Q99KL7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.55■□□□□ 0.88
Rab28Q99KL7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rab28Q99KL7 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab28Q99KL7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab28Q99KL7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rab28Q99KL7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.55■□□□□ 0.88
Rab28Q99KL7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Rab28Q99KL7 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab28Q99KL7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab28Q99KL7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab28Q99KL7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Rab28Q99KL7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.54■□□□□ 0.88
Rab28Q99KL7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms