Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp1aQ921W0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp1aQ921W0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp1aQ921W0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Chmp1aQ921W0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Chmp1aQ921W0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp1aQ921W0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp1aQ921W0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.71■□□□□ 0.59
Chmp1aQ921W0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp1aQ921W0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp1aQ921W0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp1aQ921W0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Chmp1aQ921W0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp1aQ921W0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp1aQ921W0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp1aQ921W0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.7■□□□□ 0.58
Chmp1aQ921W0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp1aQ921W0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp1aQ921W0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp1aQ921W0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp1aQ921W0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp1aQ921W0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp1aQ921W0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp1aQ921W0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Chmp1aQ921W0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp1aQ921W0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp1aQ921W0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp1aQ921W0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp1aQ921W0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp1aQ921W0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp1aQ921W0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Chmp1aQ921W0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp1aQ921W0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Chmp1aQ921W0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp1aQ921W0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.67■□□□□ 0.58
Chmp1aQ921W0 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.67■□□□□ 0.58
Chmp1aQ921W0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp1aQ921W0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp1aQ921W0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp1aQ921W0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.66■□□□□ 0.58
Chmp1aQ921W0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp1aQ921W0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Chmp1aQ921W0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp1aQ921W0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Chmp1aQ921W0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp1aQ921W0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Chmp1aQ921W0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp1aQ921W0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp1aQ921W0 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.65■□□□□ 0.58
Chmp1aQ921W0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp1aQ921W0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.65■□□□□ 0.58
Chmp1aQ921W0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp1aQ921W0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.64■□□□□ 0.57
Chmp1aQ921W0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Chmp1aQ921W0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp1aQ921W0 Gm45364-201ENSMUST00000210883 159 ntBASIC18.64■□□□□ 0.57
Chmp1aQ921W0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp1aQ921W0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp1aQ921W0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp1aQ921W0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp1aQ921W0 Notumos-201ENSMUST00000151998 2659 ntBASIC18.63■□□□□ 0.57
Chmp1aQ921W0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp1aQ921W0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp1aQ921W0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Chmp1aQ921W0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp1aQ921W0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp1aQ921W0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp1aQ921W0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp1aQ921W0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp1aQ921W0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp1aQ921W0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.62■□□□□ 0.57
Chmp1aQ921W0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.62■□□□□ 0.57
Chmp1aQ921W0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.62■□□□□ 0.57
Chmp1aQ921W0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Chmp1aQ921W0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp1aQ921W0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp1aQ921W0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Chmp1aQ921W0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Chmp1aQ921W0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp1aQ921W0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp1aQ921W0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp1aQ921W0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp1aQ921W0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp1aQ921W0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Chmp1aQ921W0 Gm8503-201ENSMUST00000118131 455 ntBASIC18.6■□□□□ 0.57
Chmp1aQ921W0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp1aQ921W0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp1aQ921W0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Chmp1aQ921W0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.6■□□□□ 0.57
Chmp1aQ921W0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp1aQ921W0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Chmp1aQ921W0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Chmp1aQ921W0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Chmp1aQ921W0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Chmp1aQ921W0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp1aQ921W0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp1aQ921W0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp1aQ921W0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp1aQ921W0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp1aQ921W0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms