Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc1bQ920F6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Smc1bQ920F6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.44■■□□□ 1.5
Smc1bQ920F6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC24.44■■□□□ 1.5
Smc1bQ920F6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc1bQ920F6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc1bQ920F6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc1bQ920F6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Smc1bQ920F6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Smc1bQ920F6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Smc1bQ920F6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Smc1bQ920F6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC24.42■■□□□ 1.5
Smc1bQ920F6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Smc1bQ920F6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Smc1bQ920F6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Smc1bQ920F6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC24.42■■□□□ 1.5
Smc1bQ920F6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC24.41■■□□□ 1.5
Smc1bQ920F6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Smc1bQ920F6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC24.41■■□□□ 1.5
Smc1bQ920F6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC24.41■■□□□ 1.5
Smc1bQ920F6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC24.41■■□□□ 1.5
Smc1bQ920F6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Smc1bQ920F6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Smc1bQ920F6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC24.4■■□□□ 1.5
Smc1bQ920F6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Smc1bQ920F6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
Smc1bQ920F6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.5
Smc1bQ920F6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Smc1bQ920F6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Smc1bQ920F6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Smc1bQ920F6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Smc1bQ920F6 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Smc1bQ920F6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Smc1bQ920F6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Smc1bQ920F6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Smc1bQ920F6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Smc1bQ920F6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Smc1bQ920F6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Smc1bQ920F6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Smc1bQ920F6 Gm7199-201ENSMUST00000118327 1485 ntBASIC24.38■■□□□ 1.49
Smc1bQ920F6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Smc1bQ920F6 Appbp2os-202ENSMUST00000206972 447 ntBASIC24.38■■□□□ 1.49
Smc1bQ920F6 Gm40881-201ENSMUST00000223397 166 ntBASIC24.38■■□□□ 1.49
Smc1bQ920F6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Smc1bQ920F6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Smc1bQ920F6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC24.37■■□□□ 1.49
Smc1bQ920F6 Gm12922-201ENSMUST00000120626 809 ntBASIC24.36■■□□□ 1.49
Smc1bQ920F6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Smc1bQ920F6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC24.36■■□□□ 1.49
Smc1bQ920F6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Smc1bQ920F6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
Smc1bQ920F6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Smc1bQ920F6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Smc1bQ920F6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC24.35■■□□□ 1.49
Smc1bQ920F6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Smc1bQ920F6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smc1bQ920F6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
Smc1bQ920F6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Smc1bQ920F6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smc1bQ920F6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC24.34■■□□□ 1.49
Smc1bQ920F6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smc1bQ920F6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smc1bQ920F6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC24.33■■□□□ 1.49
Smc1bQ920F6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Smc1bQ920F6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
Smc1bQ920F6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.49
Smc1bQ920F6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Smc1bQ920F6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC24.33■■□□□ 1.49
Smc1bQ920F6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC24.33■■□□□ 1.49
Smc1bQ920F6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Smc1bQ920F6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Smc1bQ920F6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.32■■□□□ 1.48
Smc1bQ920F6 Gm12821-201ENSMUST00000120022 600 ntBASIC24.32■■□□□ 1.48
Smc1bQ920F6 AC140930.3-201ENSMUST00000222935 274 ntBASIC24.32■■□□□ 1.48
Smc1bQ920F6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.32■■□□□ 1.48
Smc1bQ920F6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Smc1bQ920F6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Smc1bQ920F6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Smc1bQ920F6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Smc1bQ920F6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Smc1bQ920F6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smc1bQ920F6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smc1bQ920F6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC24.3■■□□□ 1.48
Smc1bQ920F6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Smc1bQ920F6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Smc1bQ920F6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Smc1bQ920F6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Smc1bQ920F6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Smc1bQ920F6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Smc1bQ920F6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC24.28■■□□□ 1.48
Smc1bQ920F6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smc1bQ920F6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smc1bQ920F6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
Smc1bQ920F6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC24.28■■□□□ 1.48
Smc1bQ920F6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smc1bQ920F6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Smc1bQ920F6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Smc1bQ920F6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Smc1bQ920F6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC24.27■■□□□ 1.48
Smc1bQ920F6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms