Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdha1Q91Y21 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdha1Q91Y21 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdha1Q91Y21 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.27■■□□□ 1.16
Pcdha1Q91Y21 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.27■■□□□ 1.16
Pcdha1Q91Y21 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.27■■□□□ 1.16
Pcdha1Q91Y21 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.27■■□□□ 1.16
Pcdha1Q91Y21 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.27■■□□□ 1.16
Pcdha1Q91Y21 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdha1Q91Y21 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.27■■□□□ 1.15
Pcdha1Q91Y21 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdha1Q91Y21 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Pcdha1Q91Y21 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.26■■□□□ 1.15
Pcdha1Q91Y21 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.26■■□□□ 1.15
Pcdha1Q91Y21 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdha1Q91Y21 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Pcdha1Q91Y21 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdha1Q91Y21 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdha1Q91Y21 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Pcdha1Q91Y21 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdha1Q91Y21 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdha1Q91Y21 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdha1Q91Y21 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdha1Q91Y21 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdha1Q91Y21 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Pcdha1Q91Y21 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdha1Q91Y21 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdha1Q91Y21 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdha1Q91Y21 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.24■■□□□ 1.15
Pcdha1Q91Y21 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.24■■□□□ 1.15
Pcdha1Q91Y21 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.24■■□□□ 1.15
Pcdha1Q91Y21 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdha1Q91Y21 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdha1Q91Y21 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdha1Q91Y21 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdha1Q91Y21 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdha1Q91Y21 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha1Q91Y21 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.22■■□□□ 1.15
Pcdha1Q91Y21 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha1Q91Y21 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha1Q91Y21 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha1Q91Y21 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha1Q91Y21 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha1Q91Y21 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha1Q91Y21 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha1Q91Y21 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha1Q91Y21 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdha1Q91Y21 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdha1Q91Y21 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdha1Q91Y21 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.21■■□□□ 1.15
Pcdha1Q91Y21 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdha1Q91Y21 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdha1Q91Y21 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdha1Q91Y21 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdha1Q91Y21 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Pcdha1Q91Y21 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Pcdha1Q91Y21 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.2■■□□□ 1.14
Pcdha1Q91Y21 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdha1Q91Y21 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdha1Q91Y21 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdha1Q91Y21 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdha1Q91Y21 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.19■■□□□ 1.14
Pcdha1Q91Y21 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdha1Q91Y21 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Pcdha1Q91Y21 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdha1Q91Y21 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdha1Q91Y21 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.19■■□□□ 1.14
Pcdha1Q91Y21 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.19■■□□□ 1.14
Pcdha1Q91Y21 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdha1Q91Y21 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdha1Q91Y21 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdha1Q91Y21 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.18■■□□□ 1.14
Pcdha1Q91Y21 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.18■■□□□ 1.14
Pcdha1Q91Y21 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.18■■□□□ 1.14
Pcdha1Q91Y21 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdha1Q91Y21 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdha1Q91Y21 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdha1Q91Y21 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdha1Q91Y21 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.17■■□□□ 1.14
Pcdha1Q91Y21 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.17■■□□□ 1.14
Pcdha1Q91Y21 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.17■■□□□ 1.14
Pcdha1Q91Y21 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.17■■□□□ 1.14
Pcdha1Q91Y21 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.17■■□□□ 1.14
Pcdha1Q91Y21 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdha1Q91Y21 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdha1Q91Y21 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.16■■□□□ 1.14
Pcdha1Q91Y21 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Pcdha1Q91Y21 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Pcdha1Q91Y21 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.16■■□□□ 1.14
Pcdha1Q91Y21 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdha1Q91Y21 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdha1Q91Y21 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdha1Q91Y21 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Pcdha1Q91Y21 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdha1Q91Y21 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdha1Q91Y21 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdha1Q91Y21 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdha1Q91Y21 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdha1Q91Y21 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdha1Q91Y21 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms