Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga3Q91XY5 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga3Q91XY5 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Pcdhga3Q91XY5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdhga3Q91XY5 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga3Q91XY5 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Pcdhga3Q91XY5 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga3Q91XY5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Pcdhga3Q91XY5 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhga3Q91XY5 Gm10420-201ENSMUST00000121713 882 ntBASIC18.83■□□□□ 0.6
Pcdhga3Q91XY5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.83■□□□□ 0.6
Pcdhga3Q91XY5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhga3Q91XY5 Cap2-205ENSMUST00000225824 1634 ntBASIC18.82■□□□□ 0.6
Pcdhga3Q91XY5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga3Q91XY5 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga3Q91XY5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga3Q91XY5 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.82■□□□□ 0.6
Pcdhga3Q91XY5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga3Q91XY5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga3Q91XY5 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga3Q91XY5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga3Q91XY5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcdhga3Q91XY5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.81■□□□□ 0.6
Pcdhga3Q91XY5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhga3Q91XY5 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga3Q91XY5 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Pcdhga3Q91XY5 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga3Q91XY5 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga3Q91XY5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga3Q91XY5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga3Q91XY5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga3Q91XY5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhga3Q91XY5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga3Q91XY5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga3Q91XY5 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga3Q91XY5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga3Q91XY5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pcdhga3Q91XY5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga3Q91XY5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga3Q91XY5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhga3Q91XY5 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga3Q91XY5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pcdhga3Q91XY5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga3Q91XY5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga3Q91XY5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga3Q91XY5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga3Q91XY5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga3Q91XY5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga3Q91XY5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga3Q91XY5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga3Q91XY5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhga3Q91XY5 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.78■□□□□ 0.6
Pcdhga3Q91XY5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdhga3Q91XY5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga3Q91XY5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga3Q91XY5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga3Q91XY5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga3Q91XY5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga3Q91XY5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga3Q91XY5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga3Q91XY5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga3Q91XY5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga3Q91XY5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdhga3Q91XY5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhga3Q91XY5 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhga3Q91XY5 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga3Q91XY5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga3Q91XY5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga3Q91XY5 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga3Q91XY5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga3Q91XY5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga3Q91XY5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdhga3Q91XY5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga3Q91XY5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdhga3Q91XY5 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.75■□□□□ 0.59
Pcdhga3Q91XY5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga3Q91XY5 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.75■□□□□ 0.59
Pcdhga3Q91XY5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhga3Q91XY5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhga3Q91XY5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga3Q91XY5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga3Q91XY5 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhga3Q91XY5 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.75■□□□□ 0.59
Pcdhga3Q91XY5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga3Q91XY5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga3Q91XY5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga3Q91XY5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga3Q91XY5 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga3Q91XY5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga3Q91XY5 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga3Q91XY5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga3Q91XY5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga3Q91XY5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhga3Q91XY5 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdhga3Q91XY5 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga3Q91XY5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga3Q91XY5 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdhga3Q91XY5 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.73■□□□□ 0.59
Pcdhga3Q91XY5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
Pcdhga3Q91XY5 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms