Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
StrcQ8VIM6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
StrcQ8VIM6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC26.4■■□□□ 1.82
StrcQ8VIM6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC26.39■■□□□ 1.82
StrcQ8VIM6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.39■■□□□ 1.81
StrcQ8VIM6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
StrcQ8VIM6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
StrcQ8VIM6 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
StrcQ8VIM6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC26.38■■□□□ 1.81
StrcQ8VIM6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC26.38■■□□□ 1.81
StrcQ8VIM6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
StrcQ8VIM6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
StrcQ8VIM6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
StrcQ8VIM6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC26.37■■□□□ 1.81
StrcQ8VIM6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
StrcQ8VIM6 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
StrcQ8VIM6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
StrcQ8VIM6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC26.37■■□□□ 1.81
StrcQ8VIM6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC26.36■■□□□ 1.81
StrcQ8VIM6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
StrcQ8VIM6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
StrcQ8VIM6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC26.35■■□□□ 1.81
StrcQ8VIM6 Gm28731-201ENSMUST00000185564 1569 ntBASIC26.34■■□□□ 1.81
StrcQ8VIM6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
StrcQ8VIM6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
StrcQ8VIM6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
StrcQ8VIM6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC26.34■■□□□ 1.81
StrcQ8VIM6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
StrcQ8VIM6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
StrcQ8VIM6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
StrcQ8VIM6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
StrcQ8VIM6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
StrcQ8VIM6 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
StrcQ8VIM6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
StrcQ8VIM6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
StrcQ8VIM6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC26.32■■□□□ 1.8
StrcQ8VIM6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
StrcQ8VIM6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
StrcQ8VIM6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
StrcQ8VIM6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
StrcQ8VIM6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
StrcQ8VIM6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC26.31■■□□□ 1.8
StrcQ8VIM6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
StrcQ8VIM6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
StrcQ8VIM6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
StrcQ8VIM6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
StrcQ8VIM6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
StrcQ8VIM6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
StrcQ8VIM6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
StrcQ8VIM6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
StrcQ8VIM6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
StrcQ8VIM6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC26.29■■□□□ 1.8
StrcQ8VIM6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
StrcQ8VIM6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
StrcQ8VIM6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC26.28■■□□□ 1.8
StrcQ8VIM6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC26.28■■□□□ 1.8
StrcQ8VIM6 Gm43137-201ENSMUST00000198052 594 ntBASIC26.28■■□□□ 1.8
StrcQ8VIM6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
StrcQ8VIM6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
StrcQ8VIM6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
StrcQ8VIM6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
StrcQ8VIM6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
StrcQ8VIM6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
StrcQ8VIM6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC26.26■■□□□ 1.79
StrcQ8VIM6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
StrcQ8VIM6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
StrcQ8VIM6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
StrcQ8VIM6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
StrcQ8VIM6 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
StrcQ8VIM6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
StrcQ8VIM6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
StrcQ8VIM6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
StrcQ8VIM6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
StrcQ8VIM6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
StrcQ8VIM6 Gm12251-201ENSMUST00000117893 792 ntBASIC26.24■■□□□ 1.79
StrcQ8VIM6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
StrcQ8VIM6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
StrcQ8VIM6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC26.24■■□□□ 1.79
StrcQ8VIM6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
StrcQ8VIM6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
StrcQ8VIM6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
StrcQ8VIM6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
StrcQ8VIM6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC26.23■■□□□ 1.79
StrcQ8VIM6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
StrcQ8VIM6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
StrcQ8VIM6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
StrcQ8VIM6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
StrcQ8VIM6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC26.22■■□□□ 1.79
StrcQ8VIM6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
StrcQ8VIM6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
StrcQ8VIM6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
StrcQ8VIM6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
StrcQ8VIM6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
StrcQ8VIM6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
StrcQ8VIM6 Gm9207-201ENSMUST00000198773 1115 ntBASIC26.21■■□□□ 1.79
StrcQ8VIM6 Gm21168-201ENSMUST00000199646 1096 ntBASIC26.21■■□□□ 1.79
StrcQ8VIM6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
StrcQ8VIM6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
StrcQ8VIM6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC26.2■■□□□ 1.79
StrcQ8VIM6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms