Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
H1fooQ8VIK3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
H1fooQ8VIK3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
H1fooQ8VIK3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
H1fooQ8VIK3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
H1fooQ8VIK3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.81■□□□□ 0.44
H1fooQ8VIK3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H1fooQ8VIK3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
H1fooQ8VIK3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
H1fooQ8VIK3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H1fooQ8VIK3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H1fooQ8VIK3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
H1fooQ8VIK3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
H1fooQ8VIK3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
H1fooQ8VIK3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H1fooQ8VIK3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
H1fooQ8VIK3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
H1fooQ8VIK3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.8■□□□□ 0.44
H1fooQ8VIK3 Gm12366-201ENSMUST00000121722 873 ntBASIC17.8■□□□□ 0.44
H1fooQ8VIK3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.8■□□□□ 0.44
H1fooQ8VIK3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
H1fooQ8VIK3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
H1fooQ8VIK3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H1fooQ8VIK3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
H1fooQ8VIK3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.8■□□□□ 0.44
H1fooQ8VIK3 Gm5786-201ENSMUST00000085368 882 ntBASIC17.8■□□□□ 0.44
H1fooQ8VIK3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
H1fooQ8VIK3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H1fooQ8VIK3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
H1fooQ8VIK3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.8■□□□□ 0.44
H1fooQ8VIK3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H1fooQ8VIK3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
H1fooQ8VIK3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
H1fooQ8VIK3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H1fooQ8VIK3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
H1fooQ8VIK3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H1fooQ8VIK3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H1fooQ8VIK3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
H1fooQ8VIK3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H1fooQ8VIK3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
H1fooQ8VIK3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H1fooQ8VIK3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
H1fooQ8VIK3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
H1fooQ8VIK3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
H1fooQ8VIK3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.78■□□□□ 0.44
H1fooQ8VIK3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
H1fooQ8VIK3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
H1fooQ8VIK3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
H1fooQ8VIK3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
H1fooQ8VIK3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
H1fooQ8VIK3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
H1fooQ8VIK3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H1fooQ8VIK3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
H1fooQ8VIK3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H1fooQ8VIK3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
H1fooQ8VIK3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
H1fooQ8VIK3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
H1fooQ8VIK3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H1fooQ8VIK3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H1fooQ8VIK3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.77■□□□□ 0.44
H1fooQ8VIK3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.77■□□□□ 0.44
H1fooQ8VIK3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H1fooQ8VIK3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
H1fooQ8VIK3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
H1fooQ8VIK3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
H1fooQ8VIK3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
H1fooQ8VIK3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H1fooQ8VIK3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H1fooQ8VIK3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.76■□□□□ 0.43
H1fooQ8VIK3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H1fooQ8VIK3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.76■□□□□ 0.43
H1fooQ8VIK3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H1fooQ8VIK3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
H1fooQ8VIK3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.75■□□□□ 0.43
H1fooQ8VIK3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.75■□□□□ 0.43
H1fooQ8VIK3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H1fooQ8VIK3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H1fooQ8VIK3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.74■□□□□ 0.43
H1fooQ8VIK3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H1fooQ8VIK3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H1fooQ8VIK3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.73■□□□□ 0.43
H1fooQ8VIK3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
H1fooQ8VIK3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
H1fooQ8VIK3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
H1fooQ8VIK3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H1fooQ8VIK3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
H1fooQ8VIK3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.72■□□□□ 0.43
H1fooQ8VIK3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
H1fooQ8VIK3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H1fooQ8VIK3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
H1fooQ8VIK3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H1fooQ8VIK3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.72■□□□□ 0.43
H1fooQ8VIK3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H1fooQ8VIK3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.72■□□□□ 0.43
H1fooQ8VIK3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H1fooQ8VIK3 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.72■□□□□ 0.43
H1fooQ8VIK3 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.71■□□□□ 0.43
H1fooQ8VIK3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
H1fooQ8VIK3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.71■□□□□ 0.43
H1fooQ8VIK3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms