Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Atp2a1Q8R429 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Atp2a1Q8R429 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Atp2a1Q8R429 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
Atp2a1Q8R429 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.87■■□□□ 1.41
Atp2a1Q8R429 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Atp2a1Q8R429 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Atp2a1Q8R429 Gm8093-201ENSMUST00000128935 1892 ntBASIC23.86■■□□□ 1.41
Atp2a1Q8R429 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.86■■□□□ 1.41
Atp2a1Q8R429 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Atp2a1Q8R429 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Atp2a1Q8R429 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Atp2a1Q8R429 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Atp2a1Q8R429 Gm10399-202ENSMUST00000202768 748 ntBASIC23.85■■□□□ 1.41
Atp2a1Q8R429 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Atp2a1Q8R429 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Atp2a1Q8R429 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Atp2a1Q8R429 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Atp2a1Q8R429 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Atp2a1Q8R429 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Atp2a1Q8R429 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Atp2a1Q8R429 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Atp2a1Q8R429 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Atp2a1Q8R429 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
Atp2a1Q8R429 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Atp2a1Q8R429 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Atp2a1Q8R429 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Atp2a1Q8R429 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Atp2a1Q8R429 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Atp2a1Q8R429 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Atp2a1Q8R429 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Atp2a1Q8R429 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC23.83■■□□□ 1.41
Atp2a1Q8R429 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC23.83■■□□□ 1.41
Atp2a1Q8R429 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
Atp2a1Q8R429 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Atp2a1Q8R429 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Atp2a1Q8R429 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Atp2a1Q8R429 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Atp2a1Q8R429 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Atp2a1Q8R429 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC23.82■■□□□ 1.4
Atp2a1Q8R429 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Atp2a1Q8R429 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC23.82■■□□□ 1.4
Atp2a1Q8R429 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Atp2a1Q8R429 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Atp2a1Q8R429 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Atp2a1Q8R429 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Atp2a1Q8R429 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Atp2a1Q8R429 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
Atp2a1Q8R429 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Atp2a1Q8R429 Gm22238-201ENSMUST00000175222 88 ntBASIC23.81■■□□□ 1.4
Atp2a1Q8R429 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC23.81■■□□□ 1.4
Atp2a1Q8R429 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Atp2a1Q8R429 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Atp2a1Q8R429 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Atp2a1Q8R429 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Atp2a1Q8R429 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Atp2a1Q8R429 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC23.8■■□□□ 1.4
Atp2a1Q8R429 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Atp2a1Q8R429 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Atp2a1Q8R429 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Atp2a1Q8R429 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Atp2a1Q8R429 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Atp2a1Q8R429 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.79■■□□□ 1.4
Atp2a1Q8R429 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Atp2a1Q8R429 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.79■■□□□ 1.4
Atp2a1Q8R429 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Atp2a1Q8R429 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Atp2a1Q8R429 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Atp2a1Q8R429 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Atp2a1Q8R429 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Atp2a1Q8R429 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Atp2a1Q8R429 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Atp2a1Q8R429 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Atp2a1Q8R429 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.76■■□□□ 1.39
Atp2a1Q8R429 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Atp2a1Q8R429 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Atp2a1Q8R429 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Atp2a1Q8R429 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.75■■□□□ 1.39
Atp2a1Q8R429 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Atp2a1Q8R429 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Atp2a1Q8R429 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC23.75■■□□□ 1.39
Atp2a1Q8R429 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Atp2a1Q8R429 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Atp2a1Q8R429 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Atp2a1Q8R429 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Atp2a1Q8R429 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Atp2a1Q8R429 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.74■■□□□ 1.39
Atp2a1Q8R429 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Atp2a1Q8R429 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Atp2a1Q8R429 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Atp2a1Q8R429 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Atp2a1Q8R429 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Atp2a1Q8R429 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Atp2a1Q8R429 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC23.73■■□□□ 1.39
Atp2a1Q8R429 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Atp2a1Q8R429 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Atp2a1Q8R429 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Atp2a1Q8R429 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Atp2a1Q8R429 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Atp2a1Q8R429 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms