Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clrn1Q8K445 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clrn1Q8K445 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.09■□□□□ 0.81
Clrn1Q8K445 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clrn1Q8K445 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.09■□□□□ 0.81
Clrn1Q8K445 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clrn1Q8K445 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.08■□□□□ 0.81
Clrn1Q8K445 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Clrn1Q8K445 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Clrn1Q8K445 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Clrn1Q8K445 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clrn1Q8K445 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.08■□□□□ 0.81
Clrn1Q8K445 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.08■□□□□ 0.81
Clrn1Q8K445 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clrn1Q8K445 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clrn1Q8K445 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Clrn1Q8K445 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clrn1Q8K445 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clrn1Q8K445 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.08■□□□□ 0.8
Clrn1Q8K445 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clrn1Q8K445 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn1Q8K445 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn1Q8K445 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn1Q8K445 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn1Q8K445 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn1Q8K445 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn1Q8K445 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clrn1Q8K445 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clrn1Q8K445 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Clrn1Q8K445 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.06■□□□□ 0.8
Clrn1Q8K445 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clrn1Q8K445 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Clrn1Q8K445 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clrn1Q8K445 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.05■□□□□ 0.8
Clrn1Q8K445 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.05■□□□□ 0.8
Clrn1Q8K445 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.05■□□□□ 0.8
Clrn1Q8K445 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.05■□□□□ 0.8
Clrn1Q8K445 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn1Q8K445 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn1Q8K445 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn1Q8K445 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn1Q8K445 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn1Q8K445 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.04■□□□□ 0.8
Clrn1Q8K445 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.04■□□□□ 0.8
Clrn1Q8K445 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn1Q8K445 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn1Q8K445 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn1Q8K445 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn1Q8K445 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn1Q8K445 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn1Q8K445 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn1Q8K445 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn1Q8K445 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.03■□□□□ 0.8
Clrn1Q8K445 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn1Q8K445 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn1Q8K445 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn1Q8K445 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn1Q8K445 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Clrn1Q8K445 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.8
Clrn1Q8K445 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clrn1Q8K445 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clrn1Q8K445 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Clrn1Q8K445 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clrn1Q8K445 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clrn1Q8K445 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clrn1Q8K445 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.02■□□□□ 0.8
Clrn1Q8K445 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Clrn1Q8K445 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clrn1Q8K445 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Clrn1Q8K445 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Clrn1Q8K445 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clrn1Q8K445 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clrn1Q8K445 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clrn1Q8K445 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clrn1Q8K445 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.01■□□□□ 0.79
Clrn1Q8K445 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clrn1Q8K445 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clrn1Q8K445 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Clrn1Q8K445 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clrn1Q8K445 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Clrn1Q8K445 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clrn1Q8K445 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20■□□□□ 0.79
Clrn1Q8K445 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Clrn1Q8K445 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clrn1Q8K445 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20■□□□□ 0.79
Clrn1Q8K445 Gm5921-201ENSMUST00000075898 882 ntBASIC20■□□□□ 0.79
Clrn1Q8K445 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clrn1Q8K445 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Clrn1Q8K445 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.99■□□□□ 0.79
Clrn1Q8K445 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clrn1Q8K445 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Clrn1Q8K445 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clrn1Q8K445 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clrn1Q8K445 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clrn1Q8K445 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Clrn1Q8K445 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clrn1Q8K445 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clrn1Q8K445 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clrn1Q8K445 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clrn1Q8K445 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms