Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hmgcs1Q8JZK9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hmgcs1Q8JZK9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hmgcs1Q8JZK9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmgcs1Q8JZK9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hmgcs1Q8JZK9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.3■□□□□ 0.84
Hmgcs1Q8JZK9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Hmgcs1Q8JZK9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Hmgcs1Q8JZK9 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.3■□□□□ 0.84
Hmgcs1Q8JZK9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmgcs1Q8JZK9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmgcs1Q8JZK9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hmgcs1Q8JZK9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hmgcs1Q8JZK9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hmgcs1Q8JZK9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hmgcs1Q8JZK9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hmgcs1Q8JZK9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hmgcs1Q8JZK9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Hmgcs1Q8JZK9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmgcs1Q8JZK9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Hmgcs1Q8JZK9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Hmgcs1Q8JZK9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmgcs1Q8JZK9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Hmgcs1Q8JZK9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmgcs1Q8JZK9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.28■□□□□ 0.84
Hmgcs1Q8JZK9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Hmgcs1Q8JZK9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Hmgcs1Q8JZK9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmgcs1Q8JZK9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmgcs1Q8JZK9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgcs1Q8JZK9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgcs1Q8JZK9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgcs1Q8JZK9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgcs1Q8JZK9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgcs1Q8JZK9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
Hmgcs1Q8JZK9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgcs1Q8JZK9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Hmgcs1Q8JZK9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Hmgcs1Q8JZK9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmgcs1Q8JZK9 Gm14523-201ENSMUST00000117260 558 ntBASIC20.26■□□□□ 0.83
Hmgcs1Q8JZK9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmgcs1Q8JZK9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Hmgcs1Q8JZK9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgcs1Q8JZK9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgcs1Q8JZK9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Hmgcs1Q8JZK9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Hmgcs1Q8JZK9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgcs1Q8JZK9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgcs1Q8JZK9 Mir6538-201ENSMUST00000183713 110 ntBASIC20.25■□□□□ 0.83
Hmgcs1Q8JZK9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgcs1Q8JZK9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.25■□□□□ 0.83
Hmgcs1Q8JZK9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Hmgcs1Q8JZK9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgcs1Q8JZK9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgcs1Q8JZK9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgcs1Q8JZK9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgcs1Q8JZK9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgcs1Q8JZK9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Hmgcs1Q8JZK9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgcs1Q8JZK9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgcs1Q8JZK9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgcs1Q8JZK9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgcs1Q8JZK9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgcs1Q8JZK9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Hmgcs1Q8JZK9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Hmgcs1Q8JZK9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.23■□□□□ 0.83
Hmgcs1Q8JZK9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgcs1Q8JZK9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgcs1Q8JZK9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgcs1Q8JZK9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgcs1Q8JZK9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgcs1Q8JZK9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgcs1Q8JZK9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgcs1Q8JZK9 Gm7332-201ENSMUST00000118351 454 ntBASIC20.22■□□□□ 0.83
Hmgcs1Q8JZK9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgcs1Q8JZK9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Hmgcs1Q8JZK9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgcs1Q8JZK9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgcs1Q8JZK9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmgcs1Q8JZK9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmgcs1Q8JZK9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmgcs1Q8JZK9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Hmgcs1Q8JZK9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmgcs1Q8JZK9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmgcs1Q8JZK9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hmgcs1Q8JZK9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmgcs1Q8JZK9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmgcs1Q8JZK9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgcs1Q8JZK9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgcs1Q8JZK9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Hmgcs1Q8JZK9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgcs1Q8JZK9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgcs1Q8JZK9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgcs1Q8JZK9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgcs1Q8JZK9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgcs1Q8JZK9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgcs1Q8JZK9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgcs1Q8JZK9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgcs1Q8JZK9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgcs1Q8JZK9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms