Protein–RNA interactions for Protein: Q8CI15

Sphk1, Sphingosine kinase 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sphk1Q8CI15 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Sphk1Q8CI15 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sphk1Q8CI15 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sphk1Q8CI15 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Sphk1Q8CI15 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sphk1Q8CI15 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sphk1Q8CI15 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sphk1Q8CI15 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sphk1Q8CI15 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Sphk1Q8CI15 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sphk1Q8CI15 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.26■□□□□ 0.99
Sphk1Q8CI15 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sphk1Q8CI15 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.26■□□□□ 0.99
Sphk1Q8CI15 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sphk1Q8CI15 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sphk1Q8CI15 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sphk1Q8CI15 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sphk1Q8CI15 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.25■□□□□ 0.99
Sphk1Q8CI15 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sphk1Q8CI15 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Sphk1Q8CI15 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Sphk1Q8CI15 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Sphk1Q8CI15 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.24■□□□□ 0.99
Sphk1Q8CI15 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sphk1Q8CI15 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sphk1Q8CI15 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sphk1Q8CI15 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.23■□□□□ 0.99
Sphk1Q8CI15 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sphk1Q8CI15 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sphk1Q8CI15 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sphk1Q8CI15 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Sphk1Q8CI15 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sphk1Q8CI15 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Sphk1Q8CI15 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sphk1Q8CI15 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sphk1Q8CI15 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sphk1Q8CI15 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sphk1Q8CI15 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sphk1Q8CI15 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sphk1Q8CI15 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
Sphk1Q8CI15 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Sphk1Q8CI15 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sphk1Q8CI15 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sphk1Q8CI15 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sphk1Q8CI15 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sphk1Q8CI15 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.19■□□□□ 0.98
Sphk1Q8CI15 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sphk1Q8CI15 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sphk1Q8CI15 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sphk1Q8CI15 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sphk1Q8CI15 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sphk1Q8CI15 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Sphk1Q8CI15 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sphk1Q8CI15 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sphk1Q8CI15 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sphk1Q8CI15 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sphk1Q8CI15 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Sphk1Q8CI15 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.18■□□□□ 0.98
Sphk1Q8CI15 Gm13241-201ENSMUST00000094493 780 ntBASIC21.18■□□□□ 0.98
Sphk1Q8CI15 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sphk1Q8CI15 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sphk1Q8CI15 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sphk1Q8CI15 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sphk1Q8CI15 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sphk1Q8CI15 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sphk1Q8CI15 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sphk1Q8CI15 Gm9847-201ENSMUST00000052528 599 ntBASIC21.17■□□□□ 0.98
Sphk1Q8CI15 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Sphk1Q8CI15 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sphk1Q8CI15 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sphk1Q8CI15 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.16■□□□□ 0.98
Sphk1Q8CI15 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sphk1Q8CI15 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sphk1Q8CI15 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sphk1Q8CI15 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sphk1Q8CI15 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Sphk1Q8CI15 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
Sphk1Q8CI15 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sphk1Q8CI15 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.15■□□□□ 0.98
Sphk1Q8CI15 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sphk1Q8CI15 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sphk1Q8CI15 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sphk1Q8CI15 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sphk1Q8CI15 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sphk1Q8CI15 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Sphk1Q8CI15 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sphk1Q8CI15 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sphk1Q8CI15 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sphk1Q8CI15 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sphk1Q8CI15 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.14■□□□□ 0.97
Sphk1Q8CI15 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sphk1Q8CI15 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sphk1Q8CI15 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sphk1Q8CI15 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sphk1Q8CI15 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sphk1Q8CI15 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sphk1Q8CI15 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.12■□□□□ 0.97
Sphk1Q8CI15 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sphk1Q8CI15 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sphk1Q8CI15 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms