Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Smc4Q8CG47 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Smc4Q8CG47 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.82
Smc4Q8CG47 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Smc4Q8CG47 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC26.38■■□□□ 1.81
Smc4Q8CG47 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Smc4Q8CG47 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Smc4Q8CG47 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
Smc4Q8CG47 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Smc4Q8CG47 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Smc4Q8CG47 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Smc4Q8CG47 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Smc4Q8CG47 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Smc4Q8CG47 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Smc4Q8CG47 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Smc4Q8CG47 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Smc4Q8CG47 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC26.36■■□□□ 1.81
Smc4Q8CG47 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Smc4Q8CG47 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
Smc4Q8CG47 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC26.35■■□□□ 1.81
Smc4Q8CG47 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Smc4Q8CG47 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Smc4Q8CG47 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Smc4Q8CG47 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC26.34■■□□□ 1.81
Smc4Q8CG47 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Smc4Q8CG47 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Smc4Q8CG47 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Smc4Q8CG47 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC26.34■■□□□ 1.81
Smc4Q8CG47 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Smc4Q8CG47 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Smc4Q8CG47 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Smc4Q8CG47 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Smc4Q8CG47 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Smc4Q8CG47 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Smc4Q8CG47 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC26.32■■□□□ 1.8
Smc4Q8CG47 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Smc4Q8CG47 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Smc4Q8CG47 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Smc4Q8CG47 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Smc4Q8CG47 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Smc4Q8CG47 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Smc4Q8CG47 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC26.31■■□□□ 1.8
Smc4Q8CG47 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Smc4Q8CG47 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Smc4Q8CG47 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Smc4Q8CG47 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC26.3■■□□□ 1.8
Smc4Q8CG47 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC26.3■■□□□ 1.8
Smc4Q8CG47 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Smc4Q8CG47 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Smc4Q8CG47 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Smc4Q8CG47 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC26.29■■□□□ 1.8
Smc4Q8CG47 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC26.29■■□□□ 1.8
Smc4Q8CG47 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Smc4Q8CG47 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC26.29■■□□□ 1.8
Smc4Q8CG47 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Smc4Q8CG47 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Smc4Q8CG47 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Smc4Q8CG47 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Smc4Q8CG47 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Smc4Q8CG47 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Smc4Q8CG47 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Smc4Q8CG47 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Smc4Q8CG47 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Smc4Q8CG47 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Smc4Q8CG47 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC26.28■■□□□ 1.8
Smc4Q8CG47 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Smc4Q8CG47 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC26.27■■□□□ 1.8
Smc4Q8CG47 AC116713.1-201ENSMUST00000215074 430 ntBASIC26.27■■□□□ 1.8
Smc4Q8CG47 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Smc4Q8CG47 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC26.27■■□□□ 1.8
Smc4Q8CG47 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Smc4Q8CG47 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Smc4Q8CG47 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Smc4Q8CG47 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC26.26■■□□□ 1.79
Smc4Q8CG47 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Smc4Q8CG47 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Smc4Q8CG47 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Smc4Q8CG47 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Smc4Q8CG47 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Smc4Q8CG47 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC26.25■■□□□ 1.79
Smc4Q8CG47 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Smc4Q8CG47 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Smc4Q8CG47 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
Smc4Q8CG47 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Smc4Q8CG47 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC26.24■■□□□ 1.79
Smc4Q8CG47 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC26.24■■□□□ 1.79
Smc4Q8CG47 H3f3aos-201ENSMUST00000097448 2905 ntBASIC26.24■■□□□ 1.79
Smc4Q8CG47 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Smc4Q8CG47 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Smc4Q8CG47 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Smc4Q8CG47 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Smc4Q8CG47 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Smc4Q8CG47 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Smc4Q8CG47 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Smc4Q8CG47 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Smc4Q8CG47 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC26.23■■□□□ 1.79
Smc4Q8CG47 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Smc4Q8CG47 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC26.22■■□□□ 1.79
Smc4Q8CG47 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC26.22■■□□□ 1.79
Smc4Q8CG47 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms