Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rft1Q8C3B8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rft1Q8C3B8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Rft1Q8C3B8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Rft1Q8C3B8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.84■□□□□ 0.61
Rft1Q8C3B8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rft1Q8C3B8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rft1Q8C3B8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rft1Q8C3B8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rft1Q8C3B8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.83■□□□□ 0.61
Rft1Q8C3B8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rft1Q8C3B8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rft1Q8C3B8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rft1Q8C3B8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rft1Q8C3B8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rft1Q8C3B8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Rft1Q8C3B8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.83■□□□□ 0.6
Rft1Q8C3B8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.82■□□□□ 0.6
Rft1Q8C3B8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rft1Q8C3B8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rft1Q8C3B8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.82■□□□□ 0.6
Rft1Q8C3B8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rft1Q8C3B8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rft1Q8C3B8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.82■□□□□ 0.6
Rft1Q8C3B8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rft1Q8C3B8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rft1Q8C3B8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rft1Q8C3B8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rft1Q8C3B8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.81■□□□□ 0.6
Rft1Q8C3B8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rft1Q8C3B8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rft1Q8C3B8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rft1Q8C3B8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rft1Q8C3B8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rft1Q8C3B8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rft1Q8C3B8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rft1Q8C3B8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rft1Q8C3B8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.8■□□□□ 0.6
Rft1Q8C3B8 Gm44428-201ENSMUST00000204474 874 ntBASIC18.8■□□□□ 0.6
Rft1Q8C3B8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rft1Q8C3B8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rft1Q8C3B8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rft1Q8C3B8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rft1Q8C3B8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rft1Q8C3B8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rft1Q8C3B8 Gm14523-201ENSMUST00000117260 558 ntBASIC18.79■□□□□ 0.6
Rft1Q8C3B8 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.79■□□□□ 0.6
Rft1Q8C3B8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rft1Q8C3B8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rft1Q8C3B8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rft1Q8C3B8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rft1Q8C3B8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rft1Q8C3B8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rft1Q8C3B8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rft1Q8C3B8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.78■□□□□ 0.6
Rft1Q8C3B8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rft1Q8C3B8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rft1Q8C3B8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rft1Q8C3B8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rft1Q8C3B8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rft1Q8C3B8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.77■□□□□ 0.6
Rft1Q8C3B8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rft1Q8C3B8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rft1Q8C3B8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rft1Q8C3B8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rft1Q8C3B8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rft1Q8C3B8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rft1Q8C3B8 Gm7332-201ENSMUST00000118351 454 ntBASIC18.76■□□□□ 0.59
Rft1Q8C3B8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Rft1Q8C3B8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Rft1Q8C3B8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rft1Q8C3B8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rft1Q8C3B8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rft1Q8C3B8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rft1Q8C3B8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rft1Q8C3B8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rft1Q8C3B8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Rft1Q8C3B8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rft1Q8C3B8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.74■□□□□ 0.59
Rft1Q8C3B8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rft1Q8C3B8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Rft1Q8C3B8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rft1Q8C3B8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rft1Q8C3B8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rft1Q8C3B8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rft1Q8C3B8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rft1Q8C3B8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rft1Q8C3B8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rft1Q8C3B8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rft1Q8C3B8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rft1Q8C3B8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rft1Q8C3B8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rft1Q8C3B8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rft1Q8C3B8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rft1Q8C3B8 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.71■□□□□ 0.59
Rft1Q8C3B8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rft1Q8C3B8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rft1Q8C3B8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.71■□□□□ 0.59
Rft1Q8C3B8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.71■□□□□ 0.59
Rft1Q8C3B8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms