Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ckap4Q8BMK4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ckap4Q8BMK4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ckap4Q8BMK4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.03■□□□□ 0.8
Ckap4Q8BMK4 Gm11175-201ENSMUST00000116172 543 ntBASIC20.03■□□□□ 0.8
Ckap4Q8BMK4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ckap4Q8BMK4 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.03■□□□□ 0.8
Ckap4Q8BMK4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ckap4Q8BMK4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ckap4Q8BMK4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ckap4Q8BMK4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ckap4Q8BMK4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ckap4Q8BMK4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ckap4Q8BMK4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ckap4Q8BMK4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Ckap4Q8BMK4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ckap4Q8BMK4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ckap4Q8BMK4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ckap4Q8BMK4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ckap4Q8BMK4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ckap4Q8BMK4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ckap4Q8BMK4 Hsf1-207ENSMUST00000228371 2102 ntBASIC20■□□□□ 0.79
Ckap4Q8BMK4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ckap4Q8BMK4 Gm22567-201ENSMUST00000175542 342 ntBASIC20■□□□□ 0.79
Ckap4Q8BMK4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20■□□□□ 0.79
Ckap4Q8BMK4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ckap4Q8BMK4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ckap4Q8BMK4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ckap4Q8BMK4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ckap4Q8BMK4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ckap4Q8BMK4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ckap4Q8BMK4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ckap4Q8BMK4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ckap4Q8BMK4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.98■□□□□ 0.79
Ckap4Q8BMK4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ckap4Q8BMK4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ckap4Q8BMK4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ckap4Q8BMK4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ckap4Q8BMK4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
Ckap4Q8BMK4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ckap4Q8BMK4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.97■□□□□ 0.79
Ckap4Q8BMK4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.97■□□□□ 0.79
Ckap4Q8BMK4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ckap4Q8BMK4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ckap4Q8BMK4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ckap4Q8BMK4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ckap4Q8BMK4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ckap4Q8BMK4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ckap4Q8BMK4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
Ckap4Q8BMK4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ckap4Q8BMK4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ckap4Q8BMK4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ckap4Q8BMK4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ckap4Q8BMK4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ckap4Q8BMK4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ckap4Q8BMK4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.95■□□□□ 0.78
Ckap4Q8BMK4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ckap4Q8BMK4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.95■□□□□ 0.78
Ckap4Q8BMK4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ckap4Q8BMK4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ckap4Q8BMK4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ckap4Q8BMK4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ckap4Q8BMK4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ckap4Q8BMK4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.94■□□□□ 0.78
Ckap4Q8BMK4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ckap4Q8BMK4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.94■□□□□ 0.78
Ckap4Q8BMK4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Ckap4Q8BMK4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ckap4Q8BMK4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ckap4Q8BMK4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ckap4Q8BMK4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ckap4Q8BMK4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ckap4Q8BMK4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ckap4Q8BMK4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ckap4Q8BMK4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ckap4Q8BMK4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ckap4Q8BMK4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ckap4Q8BMK4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ckap4Q8BMK4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ckap4Q8BMK4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ckap4Q8BMK4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ckap4Q8BMK4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ckap4Q8BMK4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ckap4Q8BMK4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ckap4Q8BMK4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ckap4Q8BMK4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ckap4Q8BMK4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ckap4Q8BMK4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ckap4Q8BMK4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ckap4Q8BMK4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ckap4Q8BMK4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap4Q8BMK4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ckap4Q8BMK4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap4Q8BMK4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ckap4Q8BMK4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap4Q8BMK4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap4Q8BMK4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Ckap4Q8BMK4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.9■□□□□ 0.78
Ckap4Q8BMK4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap4Q8BMK4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms