Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Col16a1Q8BLX7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Col16a1Q8BLX7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC28.8■■■□□ 2.2
Col16a1Q8BLX7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Col16a1Q8BLX7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
Col16a1Q8BLX7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Col16a1Q8BLX7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC28.77■■■□□ 2.2
Col16a1Q8BLX7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Col16a1Q8BLX7 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Col16a1Q8BLX7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Col16a1Q8BLX7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
Col16a1Q8BLX7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.2
Col16a1Q8BLX7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
Col16a1Q8BLX7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Col16a1Q8BLX7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Col16a1Q8BLX7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Col16a1Q8BLX7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Col16a1Q8BLX7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
Col16a1Q8BLX7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
Col16a1Q8BLX7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Col16a1Q8BLX7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Col16a1Q8BLX7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Col16a1Q8BLX7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC28.73■■■□□ 2.19
Col16a1Q8BLX7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Col16a1Q8BLX7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Col16a1Q8BLX7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Col16a1Q8BLX7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Col16a1Q8BLX7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
Col16a1Q8BLX7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Col16a1Q8BLX7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Col16a1Q8BLX7 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Col16a1Q8BLX7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Col16a1Q8BLX7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
Col16a1Q8BLX7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
Col16a1Q8BLX7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Col16a1Q8BLX7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Col16a1Q8BLX7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Col16a1Q8BLX7 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Col16a1Q8BLX7 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC28.69■■■□□ 2.18
Col16a1Q8BLX7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Col16a1Q8BLX7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Col16a1Q8BLX7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Col16a1Q8BLX7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Col16a1Q8BLX7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Col16a1Q8BLX7 Gm10620-201ENSMUST00000098379 1332 ntBASIC28.68■■■□□ 2.18
Col16a1Q8BLX7 Gm8495-201ENSMUST00000188740 694 ntBASIC28.68■■■□□ 2.18
Col16a1Q8BLX7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC28.67■■■□□ 2.18
Col16a1Q8BLX7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Col16a1Q8BLX7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Col16a1Q8BLX7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Col16a1Q8BLX7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC28.67■■■□□ 2.18
Col16a1Q8BLX7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Col16a1Q8BLX7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
Col16a1Q8BLX7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Col16a1Q8BLX7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Col16a1Q8BLX7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Col16a1Q8BLX7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Col16a1Q8BLX7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Col16a1Q8BLX7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
Col16a1Q8BLX7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Col16a1Q8BLX7 Gm18284-201ENSMUST00000172604 624 ntBASIC28.66■■■□□ 2.18
Col16a1Q8BLX7 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Col16a1Q8BLX7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Col16a1Q8BLX7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
Col16a1Q8BLX7 Gm2011-201ENSMUST00000203124 1263 ntBASIC28.65■■■□□ 2.18
Col16a1Q8BLX7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC28.65■■■□□ 2.18
Col16a1Q8BLX7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC28.64■■■□□ 2.17
Col16a1Q8BLX7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC28.63■■■□□ 2.17
Col16a1Q8BLX7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC28.63■■■□□ 2.17
Col16a1Q8BLX7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Col16a1Q8BLX7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
Col16a1Q8BLX7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Col16a1Q8BLX7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Col16a1Q8BLX7 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Col16a1Q8BLX7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Col16a1Q8BLX7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Col16a1Q8BLX7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC28.62■■■□□ 2.17
Col16a1Q8BLX7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC28.62■■■□□ 2.17
Col16a1Q8BLX7 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC28.62■■■□□ 2.17
Col16a1Q8BLX7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC28.62■■■□□ 2.17
Col16a1Q8BLX7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Col16a1Q8BLX7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC28.61■■■□□ 2.17
Col16a1Q8BLX7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
Col16a1Q8BLX7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC28.61■■■□□ 2.17
Col16a1Q8BLX7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Col16a1Q8BLX7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Col16a1Q8BLX7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Col16a1Q8BLX7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Col16a1Q8BLX7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC28.6■■■□□ 2.17
Col16a1Q8BLX7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Col16a1Q8BLX7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
Col16a1Q8BLX7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
Col16a1Q8BLX7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Col16a1Q8BLX7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Col16a1Q8BLX7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Col16a1Q8BLX7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Col16a1Q8BLX7 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Col16a1Q8BLX7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC28.59■■■□□ 2.17
Col16a1Q8BLX7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
Col16a1Q8BLX7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC28.59■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms