Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clrn3Q8BHH8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clrn3Q8BHH8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clrn3Q8BHH8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clrn3Q8BHH8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Clrn3Q8BHH8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clrn3Q8BHH8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Clrn3Q8BHH8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clrn3Q8BHH8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Clrn3Q8BHH8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clrn3Q8BHH8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.89■□□□□ 0.77
Clrn3Q8BHH8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clrn3Q8BHH8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clrn3Q8BHH8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Clrn3Q8BHH8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clrn3Q8BHH8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clrn3Q8BHH8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Clrn3Q8BHH8 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.88■□□□□ 0.77
Clrn3Q8BHH8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clrn3Q8BHH8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clrn3Q8BHH8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clrn3Q8BHH8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clrn3Q8BHH8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clrn3Q8BHH8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.87■□□□□ 0.77
Clrn3Q8BHH8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clrn3Q8BHH8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clrn3Q8BHH8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clrn3Q8BHH8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.87■□□□□ 0.77
Clrn3Q8BHH8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clrn3Q8BHH8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clrn3Q8BHH8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clrn3Q8BHH8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn3Q8BHH8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Clrn3Q8BHH8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn3Q8BHH8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn3Q8BHH8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn3Q8BHH8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn3Q8BHH8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn3Q8BHH8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clrn3Q8BHH8 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.85■□□□□ 0.77
Clrn3Q8BHH8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.85■□□□□ 0.77
Clrn3Q8BHH8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clrn3Q8BHH8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clrn3Q8BHH8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clrn3Q8BHH8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Clrn3Q8BHH8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Clrn3Q8BHH8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clrn3Q8BHH8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clrn3Q8BHH8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clrn3Q8BHH8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn3Q8BHH8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn3Q8BHH8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Clrn3Q8BHH8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn3Q8BHH8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn3Q8BHH8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.84■□□□□ 0.77
Clrn3Q8BHH8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.84■□□□□ 0.77
Clrn3Q8BHH8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Clrn3Q8BHH8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.83■□□□□ 0.77
Clrn3Q8BHH8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.83■□□□□ 0.77
Clrn3Q8BHH8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clrn3Q8BHH8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Clrn3Q8BHH8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.82■□□□□ 0.76
Clrn3Q8BHH8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clrn3Q8BHH8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.82■□□□□ 0.76
Clrn3Q8BHH8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clrn3Q8BHH8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.82■□□□□ 0.76
Clrn3Q8BHH8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clrn3Q8BHH8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clrn3Q8BHH8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clrn3Q8BHH8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clrn3Q8BHH8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clrn3Q8BHH8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clrn3Q8BHH8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.81■□□□□ 0.76
Clrn3Q8BHH8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clrn3Q8BHH8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clrn3Q8BHH8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clrn3Q8BHH8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clrn3Q8BHH8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Clrn3Q8BHH8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clrn3Q8BHH8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clrn3Q8BHH8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Clrn3Q8BHH8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Clrn3Q8BHH8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.79■□□□□ 0.76
Clrn3Q8BHH8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clrn3Q8BHH8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clrn3Q8BHH8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clrn3Q8BHH8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clrn3Q8BHH8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clrn3Q8BHH8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Clrn3Q8BHH8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clrn3Q8BHH8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clrn3Q8BHH8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clrn3Q8BHH8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Clrn3Q8BHH8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clrn3Q8BHH8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clrn3Q8BHH8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clrn3Q8BHH8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clrn3Q8BHH8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clrn3Q8BHH8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clrn3Q8BHH8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms