Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim50Q810I2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.76■□□□□ 0.91
Trim50Q810I2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trim50Q810I2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.75■□□□□ 0.91
Trim50Q810I2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim50Q810I2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim50Q810I2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim50Q810I2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim50Q810I2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Trim50Q810I2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.74■□□□□ 0.91
Trim50Q810I2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim50Q810I2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim50Q810I2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.74■□□□□ 0.91
Trim50Q810I2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim50Q810I2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim50Q810I2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim50Q810I2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim50Q810I2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim50Q810I2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim50Q810I2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim50Q810I2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim50Q810I2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Trim50Q810I2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim50Q810I2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.73■□□□□ 0.91
Trim50Q810I2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.73■□□□□ 0.91
Trim50Q810I2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Trim50Q810I2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.73■□□□□ 0.91
Trim50Q810I2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim50Q810I2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim50Q810I2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim50Q810I2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.72■□□□□ 0.91
Trim50Q810I2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim50Q810I2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim50Q810I2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim50Q810I2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim50Q810I2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trim50Q810I2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim50Q810I2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim50Q810I2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim50Q810I2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim50Q810I2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Trim50Q810I2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim50Q810I2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim50Q810I2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim50Q810I2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Trim50Q810I2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim50Q810I2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim50Q810I2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim50Q810I2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim50Q810I2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Trim50Q810I2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim50Q810I2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim50Q810I2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim50Q810I2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim50Q810I2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim50Q810I2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim50Q810I2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim50Q810I2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim50Q810I2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim50Q810I2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.69■□□□□ 0.9
Trim50Q810I2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.69■□□□□ 0.9
Trim50Q810I2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim50Q810I2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim50Q810I2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim50Q810I2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim50Q810I2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim50Q810I2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim50Q810I2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim50Q810I2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim50Q810I2 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.68■□□□□ 0.9
Trim50Q810I2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim50Q810I2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.68■□□□□ 0.9
Trim50Q810I2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim50Q810I2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim50Q810I2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim50Q810I2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim50Q810I2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Trim50Q810I2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim50Q810I2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim50Q810I2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim50Q810I2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim50Q810I2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.66■□□□□ 0.9
Trim50Q810I2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim50Q810I2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim50Q810I2 Gm5921-201ENSMUST00000075898 882 ntBASIC20.66■□□□□ 0.9
Trim50Q810I2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim50Q810I2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim50Q810I2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.65■□□□□ 0.9
Trim50Q810I2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim50Q810I2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim50Q810I2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim50Q810I2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim50Q810I2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.65■□□□□ 0.9
Trim50Q810I2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim50Q810I2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim50Q810I2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim50Q810I2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim50Q810I2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim50Q810I2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.64■□□□□ 0.89
Trim50Q810I2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms