Protein–RNA interactions for Protein: Q80ZA4

Pkhd1l1, Fibrocystin-L, mousemouse

Predictions only

Length 4,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkhd1l1Q80ZA4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pkhd1l1Q80ZA4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pkhd1l1Q80ZA4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pkhd1l1Q80ZA4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pkhd1l1Q80ZA4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pkhd1l1Q80ZA4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pkhd1l1Q80ZA4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pkhd1l1Q80ZA4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pkhd1l1Q80ZA4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pkhd1l1Q80ZA4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pkhd1l1Q80ZA4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pkhd1l1Q80ZA4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pkhd1l1Q80ZA4 Gm27011-201ENSMUST00000182352 972 ntBASIC13□□□□□ -0.33
Pkhd1l1Q80ZA4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pkhd1l1Q80ZA4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pkhd1l1Q80ZA4 Gm9207-201ENSMUST00000198773 1115 ntBASIC12.99□□□□□ -0.33
Pkhd1l1Q80ZA4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pkhd1l1Q80ZA4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pkhd1l1Q80ZA4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Pkhd1l1Q80ZA4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pkhd1l1Q80ZA4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pkhd1l1Q80ZA4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Pkhd1l1Q80ZA4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Pkhd1l1Q80ZA4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC12.99□□□□□ -0.33
Pkhd1l1Q80ZA4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pkhd1l1Q80ZA4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pkhd1l1Q80ZA4 Gm28731-201ENSMUST00000185564 1569 ntBASIC12.99□□□□□ -0.33
Pkhd1l1Q80ZA4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pkhd1l1Q80ZA4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.99□□□□□ -0.33
Pkhd1l1Q80ZA4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.98□□□□□ -0.33
Pkhd1l1Q80ZA4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pkhd1l1Q80ZA4 Gm5874-201ENSMUST00000096101 508 ntBASIC12.98□□□□□ -0.33
Pkhd1l1Q80ZA4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pkhd1l1Q80ZA4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pkhd1l1Q80ZA4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pkhd1l1Q80ZA4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pkhd1l1Q80ZA4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pkhd1l1Q80ZA4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC12.98□□□□□ -0.33
Pkhd1l1Q80ZA4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pkhd1l1Q80ZA4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pkhd1l1Q80ZA4 Gm10657-201ENSMUST00000193528 1031 ntBASIC12.97□□□□□ -0.33
Pkhd1l1Q80ZA4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.97□□□□□ -0.33
Pkhd1l1Q80ZA4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pkhd1l1Q80ZA4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pkhd1l1Q80ZA4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pkhd1l1Q80ZA4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC12.97□□□□□ -0.33
Pkhd1l1Q80ZA4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC12.97□□□□□ -0.33
Pkhd1l1Q80ZA4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.97□□□□□ -0.33
Pkhd1l1Q80ZA4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pkhd1l1Q80ZA4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC12.97□□□□□ -0.33
Pkhd1l1Q80ZA4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pkhd1l1Q80ZA4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pkhd1l1Q80ZA4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pkhd1l1Q80ZA4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pkhd1l1Q80ZA4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pkhd1l1Q80ZA4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC12.96□□□□□ -0.33
Pkhd1l1Q80ZA4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Pkhd1l1Q80ZA4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pkhd1l1Q80ZA4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC12.96□□□□□ -0.33
Pkhd1l1Q80ZA4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pkhd1l1Q80ZA4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pkhd1l1Q80ZA4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pkhd1l1Q80ZA4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pkhd1l1Q80ZA4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pkhd1l1Q80ZA4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pkhd1l1Q80ZA4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Pkhd1l1Q80ZA4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pkhd1l1Q80ZA4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pkhd1l1Q80ZA4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pkhd1l1Q80ZA4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pkhd1l1Q80ZA4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pkhd1l1Q80ZA4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pkhd1l1Q80ZA4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pkhd1l1Q80ZA4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pkhd1l1Q80ZA4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pkhd1l1Q80ZA4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pkhd1l1Q80ZA4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pkhd1l1Q80ZA4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC12.94□□□□□ -0.34
Pkhd1l1Q80ZA4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pkhd1l1Q80ZA4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pkhd1l1Q80ZA4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pkhd1l1Q80ZA4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pkhd1l1Q80ZA4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC12.94□□□□□ -0.34
Pkhd1l1Q80ZA4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Pkhd1l1Q80ZA4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pkhd1l1Q80ZA4 Gm12251-201ENSMUST00000117893 792 ntBASIC12.93□□□□□ -0.34
Pkhd1l1Q80ZA4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC12.93□□□□□ -0.34
Pkhd1l1Q80ZA4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pkhd1l1Q80ZA4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pkhd1l1Q80ZA4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC12.93□□□□□ -0.34
Pkhd1l1Q80ZA4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC12.93□□□□□ -0.34
Pkhd1l1Q80ZA4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pkhd1l1Q80ZA4 Gm43017-201ENSMUST00000198296 752 ntBASIC12.93□□□□□ -0.34
Pkhd1l1Q80ZA4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pkhd1l1Q80ZA4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pkhd1l1Q80ZA4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pkhd1l1Q80ZA4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC12.93□□□□□ -0.34
Pkhd1l1Q80ZA4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pkhd1l1Q80ZA4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pkhd1l1Q80ZA4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms