Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC20.64■□□□□ 0.89
Skida1Q80YR3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Skida1Q80YR3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Skida1Q80YR3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Skida1Q80YR3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Skida1Q80YR3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Skida1Q80YR3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Skida1Q80YR3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Skida1Q80YR3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Skida1Q80YR3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.63■□□□□ 0.89
Skida1Q80YR3 Gm13241-201ENSMUST00000094493 780 ntBASIC20.63■□□□□ 0.89
Skida1Q80YR3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Skida1Q80YR3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Skida1Q80YR3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.62■□□□□ 0.89
Skida1Q80YR3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Skida1Q80YR3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Skida1Q80YR3 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC20.62■□□□□ 0.89
Skida1Q80YR3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.62■□□□□ 0.89
Skida1Q80YR3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.62■□□□□ 0.89
Skida1Q80YR3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.62■□□□□ 0.89
Skida1Q80YR3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Skida1Q80YR3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Skida1Q80YR3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Skida1Q80YR3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Skida1Q80YR3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Skida1Q80YR3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.61■□□□□ 0.89
Skida1Q80YR3 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Skida1Q80YR3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Skida1Q80YR3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Skida1Q80YR3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.6■□□□□ 0.89
Skida1Q80YR3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Skida1Q80YR3 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
Skida1Q80YR3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Skida1Q80YR3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Skida1Q80YR3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Skida1Q80YR3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Skida1Q80YR3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Skida1Q80YR3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Skida1Q80YR3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.59■□□□□ 0.89
Skida1Q80YR3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Skida1Q80YR3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.59■□□□□ 0.89
Skida1Q80YR3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Skida1Q80YR3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Skida1Q80YR3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Skida1Q80YR3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Skida1Q80YR3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Skida1Q80YR3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Skida1Q80YR3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Skida1Q80YR3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.58■□□□□ 0.89
Skida1Q80YR3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Skida1Q80YR3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Skida1Q80YR3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Skida1Q80YR3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Skida1Q80YR3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Skida1Q80YR3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Skida1Q80YR3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Skida1Q80YR3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Skida1Q80YR3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Skida1Q80YR3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Skida1Q80YR3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.57■□□□□ 0.88
Skida1Q80YR3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Skida1Q80YR3 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.57■□□□□ 0.88
Skida1Q80YR3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Skida1Q80YR3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Skida1Q80YR3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Skida1Q80YR3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Skida1Q80YR3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Skida1Q80YR3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Skida1Q80YR3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Skida1Q80YR3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Skida1Q80YR3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Skida1Q80YR3 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.55■□□□□ 0.88
Skida1Q80YR3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Skida1Q80YR3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Skida1Q80YR3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Skida1Q80YR3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Skida1Q80YR3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Skida1Q80YR3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Skida1Q80YR3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Skida1Q80YR3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Skida1Q80YR3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Skida1Q80YR3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Skida1Q80YR3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Skida1Q80YR3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Skida1Q80YR3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Skida1Q80YR3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Skida1Q80YR3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.53■□□□□ 0.88
Skida1Q80YR3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Skida1Q80YR3 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC20.53■□□□□ 0.88
Skida1Q80YR3 Serp2-204ENSMUST00000228055 705 ntBASIC20.53■□□□□ 0.88
Skida1Q80YR3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Skida1Q80YR3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Skida1Q80YR3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Skida1Q80YR3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Skida1Q80YR3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Skida1Q80YR3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Skida1Q80YR3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Skida1Q80YR3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Skida1Q80YR3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Skida1Q80YR3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms