Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC24.53■■□□□ 1.52
Prpf40bQ80W14 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Prpf40bQ80W14 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Prpf40bQ80W14 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Prpf40bQ80W14 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Prpf40bQ80W14 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Prpf40bQ80W14 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Prpf40bQ80W14 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC24.53■■□□□ 1.52
Prpf40bQ80W14 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Prpf40bQ80W14 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
Prpf40bQ80W14 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Prpf40bQ80W14 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Prpf40bQ80W14 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Prpf40bQ80W14 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC24.52■■□□□ 1.52
Prpf40bQ80W14 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Prpf40bQ80W14 Gm45417-201ENSMUST00000209533 758 ntBASIC24.52■■□□□ 1.52
Prpf40bQ80W14 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
Prpf40bQ80W14 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Prpf40bQ80W14 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC24.52■■□□□ 1.52
Prpf40bQ80W14 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Prpf40bQ80W14 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC24.51■■□□□ 1.51
Prpf40bQ80W14 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Prpf40bQ80W14 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Prpf40bQ80W14 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Prpf40bQ80W14 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC24.51■■□□□ 1.51
Prpf40bQ80W14 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Prpf40bQ80W14 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Prpf40bQ80W14 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC24.5■■□□□ 1.51
Prpf40bQ80W14 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Prpf40bQ80W14 Flvcr1-202ENSMUST00000191946 1216 ntBASIC24.49■■□□□ 1.51
Prpf40bQ80W14 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Prpf40bQ80W14 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Prpf40bQ80W14 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Prpf40bQ80W14 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Prpf40bQ80W14 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Prpf40bQ80W14 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Prpf40bQ80W14 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Prpf40bQ80W14 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Prpf40bQ80W14 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Prpf40bQ80W14 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Prpf40bQ80W14 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC24.47■■□□□ 1.51
Prpf40bQ80W14 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC24.47■■□□□ 1.51
Prpf40bQ80W14 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC24.47■■□□□ 1.51
Prpf40bQ80W14 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.47■■□□□ 1.51
Prpf40bQ80W14 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Prpf40bQ80W14 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Prpf40bQ80W14 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Prpf40bQ80W14 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Prpf40bQ80W14 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC24.46■■□□□ 1.51
Prpf40bQ80W14 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Prpf40bQ80W14 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Prpf40bQ80W14 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Prpf40bQ80W14 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC24.46■■□□□ 1.51
Prpf40bQ80W14 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Prpf40bQ80W14 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Prpf40bQ80W14 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Prpf40bQ80W14 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Prpf40bQ80W14 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Prpf40bQ80W14 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Prpf40bQ80W14 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Prpf40bQ80W14 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Prpf40bQ80W14 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC24.45■■□□□ 1.5
Prpf40bQ80W14 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Prpf40bQ80W14 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Prpf40bQ80W14 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Prpf40bQ80W14 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.44■■□□□ 1.5
Prpf40bQ80W14 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Prpf40bQ80W14 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Prpf40bQ80W14 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Prpf40bQ80W14 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Prpf40bQ80W14 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Prpf40bQ80W14 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Prpf40bQ80W14 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Prpf40bQ80W14 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
Prpf40bQ80W14 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Prpf40bQ80W14 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Prpf40bQ80W14 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Prpf40bQ80W14 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Prpf40bQ80W14 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Prpf40bQ80W14 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Prpf40bQ80W14 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Prpf40bQ80W14 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Prpf40bQ80W14 Gm28536-201ENSMUST00000190971 1317 ntBASIC24.41■■□□□ 1.5
Prpf40bQ80W14 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Prpf40bQ80W14 Gm7199-201ENSMUST00000118327 1485 ntBASIC24.41■■□□□ 1.5
Prpf40bQ80W14 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC24.41■■□□□ 1.5
Prpf40bQ80W14 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Prpf40bQ80W14 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Prpf40bQ80W14 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Prpf40bQ80W14 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Prpf40bQ80W14 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Prpf40bQ80W14 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Prpf40bQ80W14 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Prpf40bQ80W14 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Prpf40bQ80W14 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Prpf40bQ80W14 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Prpf40bQ80W14 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Prpf40bQ80W14 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Prpf40bQ80W14 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Prpf40bQ80W14 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms