Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.94■□□□□ 0.94
Pcdh19Q80TF3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Pcdh19Q80TF3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh19Q80TF3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh19Q80TF3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh19Q80TF3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh19Q80TF3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.93■□□□□ 0.94
Pcdh19Q80TF3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.93■□□□□ 0.94
Pcdh19Q80TF3 Gm10399-202ENSMUST00000202768 748 ntBASIC20.93■□□□□ 0.94
Pcdh19Q80TF3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh19Q80TF3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh19Q80TF3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh19Q80TF3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Pcdh19Q80TF3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh19Q80TF3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh19Q80TF3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.92■□□□□ 0.94
Pcdh19Q80TF3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.92■□□□□ 0.94
Pcdh19Q80TF3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh19Q80TF3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh19Q80TF3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh19Q80TF3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.91■□□□□ 0.94
Pcdh19Q80TF3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh19Q80TF3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.91■□□□□ 0.94
Pcdh19Q80TF3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh19Q80TF3 Gm40881-201ENSMUST00000223397 166 ntBASIC20.91■□□□□ 0.94
Pcdh19Q80TF3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh19Q80TF3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh19Q80TF3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pcdh19Q80TF3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh19Q80TF3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.9■□□□□ 0.94
Pcdh19Q80TF3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.9■□□□□ 0.94
Pcdh19Q80TF3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh19Q80TF3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh19Q80TF3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh19Q80TF3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdh19Q80TF3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh19Q80TF3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh19Q80TF3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.89■□□□□ 0.93
Pcdh19Q80TF3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.88■□□□□ 0.93
Pcdh19Q80TF3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh19Q80TF3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.88■□□□□ 0.93
Pcdh19Q80TF3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh19Q80TF3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh19Q80TF3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh19Q80TF3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh19Q80TF3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh19Q80TF3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
Pcdh19Q80TF3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.87■□□□□ 0.93
Pcdh19Q80TF3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.87■□□□□ 0.93
Pcdh19Q80TF3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh19Q80TF3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh19Q80TF3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh19Q80TF3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh19Q80TF3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh19Q80TF3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh19Q80TF3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh19Q80TF3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh19Q80TF3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Pcdh19Q80TF3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh19Q80TF3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh19Q80TF3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Pcdh19Q80TF3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.85■□□□□ 0.93
Pcdh19Q80TF3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.85■□□□□ 0.93
Pcdh19Q80TF3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.85■□□□□ 0.93
Pcdh19Q80TF3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh19Q80TF3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Pcdh19Q80TF3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh19Q80TF3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh19Q80TF3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh19Q80TF3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh19Q80TF3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh19Q80TF3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh19Q80TF3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh19Q80TF3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Pcdh19Q80TF3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh19Q80TF3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.83■□□□□ 0.93
Pcdh19Q80TF3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh19Q80TF3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdh19Q80TF3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Pcdh19Q80TF3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdh19Q80TF3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Pcdh19Q80TF3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh19Q80TF3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh19Q80TF3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh19Q80TF3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdh19Q80TF3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdh19Q80TF3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh19Q80TF3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Pcdh19Q80TF3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh19Q80TF3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh19Q80TF3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.81■□□□□ 0.92
Pcdh19Q80TF3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh19Q80TF3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh19Q80TF3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh19Q80TF3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh19Q80TF3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh19Q80TF3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.8■□□□□ 0.92
Pcdh19Q80TF3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh19Q80TF3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.8■□□□□ 0.92
Pcdh19Q80TF3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms