Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pif1Q80SX8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pif1Q80SX8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pif1Q80SX8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pif1Q80SX8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Pif1Q80SX8 Gm21956-201ENSMUST00000179946 522 ntBASIC19.63■□□□□ 0.73
Pif1Q80SX8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pif1Q80SX8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.63■□□□□ 0.73
Pif1Q80SX8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pif1Q80SX8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pif1Q80SX8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pif1Q80SX8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pif1Q80SX8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Pif1Q80SX8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pif1Q80SX8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pif1Q80SX8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pif1Q80SX8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pif1Q80SX8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pif1Q80SX8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pif1Q80SX8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pif1Q80SX8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pif1Q80SX8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.6■□□□□ 0.73
Pif1Q80SX8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pif1Q80SX8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pif1Q80SX8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pif1Q80SX8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pif1Q80SX8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pif1Q80SX8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pif1Q80SX8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pif1Q80SX8 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.59■□□□□ 0.73
Pif1Q80SX8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.59■□□□□ 0.73
Pif1Q80SX8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pif1Q80SX8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pif1Q80SX8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.58■□□□□ 0.72
Pif1Q80SX8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.58■□□□□ 0.72
Pif1Q80SX8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.58■□□□□ 0.72
Pif1Q80SX8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pif1Q80SX8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pif1Q80SX8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pif1Q80SX8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pif1Q80SX8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pif1Q80SX8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pif1Q80SX8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pif1Q80SX8 Gm12922-201ENSMUST00000120626 809 ntBASIC19.57■□□□□ 0.72
Pif1Q80SX8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pif1Q80SX8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pif1Q80SX8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pif1Q80SX8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.57■□□□□ 0.72
Pif1Q80SX8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pif1Q80SX8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.56■□□□□ 0.72
Pif1Q80SX8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pif1Q80SX8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pif1Q80SX8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.56■□□□□ 0.72
Pif1Q80SX8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pif1Q80SX8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.56■□□□□ 0.72
Pif1Q80SX8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pif1Q80SX8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pif1Q80SX8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pif1Q80SX8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pif1Q80SX8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pif1Q80SX8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pif1Q80SX8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pif1Q80SX8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Pif1Q80SX8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pif1Q80SX8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pif1Q80SX8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pif1Q80SX8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pif1Q80SX8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pif1Q80SX8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pif1Q80SX8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.54■□□□□ 0.72
Pif1Q80SX8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.54■□□□□ 0.72
Pif1Q80SX8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pif1Q80SX8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pif1Q80SX8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pif1Q80SX8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pif1Q80SX8 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.53■□□□□ 0.72
Pif1Q80SX8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pif1Q80SX8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pif1Q80SX8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Pif1Q80SX8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pif1Q80SX8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pif1Q80SX8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pif1Q80SX8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pif1Q80SX8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pif1Q80SX8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.52■□□□□ 0.72
Pif1Q80SX8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pif1Q80SX8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.52■□□□□ 0.72
Pif1Q80SX8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pif1Q80SX8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pif1Q80SX8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.51■□□□□ 0.71
Pif1Q80SX8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pif1Q80SX8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pif1Q80SX8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Pif1Q80SX8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pif1Q80SX8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pif1Q80SX8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pif1Q80SX8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pif1Q80SX8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pif1Q80SX8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pif1Q80SX8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms