Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Kdm1aQ6ZQ88 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
Kdm1aQ6ZQ88 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Kdm1aQ6ZQ88 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.58■■□□□ 1.37
Kdm1aQ6ZQ88 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Kdm1aQ6ZQ88 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.58■■□□□ 1.37
Kdm1aQ6ZQ88 Gm12366-201ENSMUST00000121722 873 ntBASIC23.58■■□□□ 1.37
Kdm1aQ6ZQ88 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.58■■□□□ 1.37
Kdm1aQ6ZQ88 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Kdm1aQ6ZQ88 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Kdm1aQ6ZQ88 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.58■■□□□ 1.37
Kdm1aQ6ZQ88 Gm5786-201ENSMUST00000085368 882 ntBASIC23.58■■□□□ 1.37
Kdm1aQ6ZQ88 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Kdm1aQ6ZQ88 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Kdm1aQ6ZQ88 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Kdm1aQ6ZQ88 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Kdm1aQ6ZQ88 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Kdm1aQ6ZQ88 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Kdm1aQ6ZQ88 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Kdm1aQ6ZQ88 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Kdm1aQ6ZQ88 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Kdm1aQ6ZQ88 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.56■■□□□ 1.36
Kdm1aQ6ZQ88 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC23.56■■□□□ 1.36
Kdm1aQ6ZQ88 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Kdm1aQ6ZQ88 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.56■■□□□ 1.36
Kdm1aQ6ZQ88 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
Kdm1aQ6ZQ88 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.56■■□□□ 1.36
Kdm1aQ6ZQ88 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Kdm1aQ6ZQ88 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Kdm1aQ6ZQ88 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Kdm1aQ6ZQ88 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Kdm1aQ6ZQ88 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Kdm1aQ6ZQ88 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.54■■□□□ 1.36
Kdm1aQ6ZQ88 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Kdm1aQ6ZQ88 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Kdm1aQ6ZQ88 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
Kdm1aQ6ZQ88 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Kdm1aQ6ZQ88 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Kdm1aQ6ZQ88 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.53■■□□□ 1.36
Kdm1aQ6ZQ88 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Kdm1aQ6ZQ88 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Kdm1aQ6ZQ88 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Kdm1aQ6ZQ88 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Kdm1aQ6ZQ88 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Kdm1aQ6ZQ88 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.52■■□□□ 1.36
Kdm1aQ6ZQ88 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Kdm1aQ6ZQ88 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Kdm1aQ6ZQ88 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Kdm1aQ6ZQ88 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Kdm1aQ6ZQ88 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Kdm1aQ6ZQ88 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Kdm1aQ6ZQ88 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.51■■□□□ 1.35
Kdm1aQ6ZQ88 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.51■■□□□ 1.35
Kdm1aQ6ZQ88 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Kdm1aQ6ZQ88 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Kdm1aQ6ZQ88 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Kdm1aQ6ZQ88 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Kdm1aQ6ZQ88 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Kdm1aQ6ZQ88 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Kdm1aQ6ZQ88 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Kdm1aQ6ZQ88 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.49■■□□□ 1.35
Kdm1aQ6ZQ88 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Kdm1aQ6ZQ88 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Kdm1aQ6ZQ88 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Kdm1aQ6ZQ88 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Kdm1aQ6ZQ88 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Kdm1aQ6ZQ88 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
Kdm1aQ6ZQ88 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Kdm1aQ6ZQ88 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Kdm1aQ6ZQ88 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Kdm1aQ6ZQ88 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.47■■□□□ 1.35
Kdm1aQ6ZQ88 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Kdm1aQ6ZQ88 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Kdm1aQ6ZQ88 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Kdm1aQ6ZQ88 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Kdm1aQ6ZQ88 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.47■■□□□ 1.35
Kdm1aQ6ZQ88 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.46■■□□□ 1.35
Kdm1aQ6ZQ88 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Kdm1aQ6ZQ88 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.34
Kdm1aQ6ZQ88 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Kdm1aQ6ZQ88 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Kdm1aQ6ZQ88 Gm10420-201ENSMUST00000121713 882 ntBASIC23.45■■□□□ 1.34
Kdm1aQ6ZQ88 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.45■■□□□ 1.34
Kdm1aQ6ZQ88 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.45■■□□□ 1.34
Kdm1aQ6ZQ88 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Kdm1aQ6ZQ88 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Kdm1aQ6ZQ88 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC23.44■■□□□ 1.34
Kdm1aQ6ZQ88 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Kdm1aQ6ZQ88 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Kdm1aQ6ZQ88 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.44■■□□□ 1.34
Kdm1aQ6ZQ88 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Kdm1aQ6ZQ88 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
Kdm1aQ6ZQ88 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.43■■□□□ 1.34
Kdm1aQ6ZQ88 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Kdm1aQ6ZQ88 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC23.43■■□□□ 1.34
Kdm1aQ6ZQ88 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Kdm1aQ6ZQ88 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Kdm1aQ6ZQ88 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC23.42■■□□□ 1.34
Kdm1aQ6ZQ88 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Kdm1aQ6ZQ88 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms