Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Snrnp40Q6PE01 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snrnp40Q6PE01 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snrnp40Q6PE01 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.96■□□□□ 0.63
Snrnp40Q6PE01 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.96■□□□□ 0.63
Snrnp40Q6PE01 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snrnp40Q6PE01 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Snrnp40Q6PE01 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snrnp40Q6PE01 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Snrnp40Q6PE01 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.95■□□□□ 0.62
Snrnp40Q6PE01 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Snrnp40Q6PE01 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snrnp40Q6PE01 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Snrnp40Q6PE01 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snrnp40Q6PE01 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snrnp40Q6PE01 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Snrnp40Q6PE01 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snrnp40Q6PE01 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snrnp40Q6PE01 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.94■□□□□ 0.62
Snrnp40Q6PE01 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Snrnp40Q6PE01 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Snrnp40Q6PE01 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snrnp40Q6PE01 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Snrnp40Q6PE01 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.93■□□□□ 0.62
Snrnp40Q6PE01 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Snrnp40Q6PE01 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Snrnp40Q6PE01 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snrnp40Q6PE01 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snrnp40Q6PE01 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.92■□□□□ 0.62
Snrnp40Q6PE01 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snrnp40Q6PE01 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Snrnp40Q6PE01 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Snrnp40Q6PE01 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.91■□□□□ 0.62
Snrnp40Q6PE01 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snrnp40Q6PE01 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snrnp40Q6PE01 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Snrnp40Q6PE01 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snrnp40Q6PE01 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snrnp40Q6PE01 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Snrnp40Q6PE01 Gm8495-201ENSMUST00000188740 694 ntBASIC18.9■□□□□ 0.62
Snrnp40Q6PE01 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snrnp40Q6PE01 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.89■□□□□ 0.62
Snrnp40Q6PE01 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Snrnp40Q6PE01 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snrnp40Q6PE01 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Snrnp40Q6PE01 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snrnp40Q6PE01 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snrnp40Q6PE01 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snrnp40Q6PE01 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snrnp40Q6PE01 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Snrnp40Q6PE01 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Snrnp40Q6PE01 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snrnp40Q6PE01 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Snrnp40Q6PE01 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snrnp40Q6PE01 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Snrnp40Q6PE01 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.88■□□□□ 0.61
Snrnp40Q6PE01 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.88■□□□□ 0.61
Snrnp40Q6PE01 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Snrnp40Q6PE01 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snrnp40Q6PE01 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Snrnp40Q6PE01 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snrnp40Q6PE01 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snrnp40Q6PE01 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snrnp40Q6PE01 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snrnp40Q6PE01 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Snrnp40Q6PE01 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Snrnp40Q6PE01 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Snrnp40Q6PE01 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Snrnp40Q6PE01 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Snrnp40Q6PE01 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Snrnp40Q6PE01 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Snrnp40Q6PE01 Gm18284-201ENSMUST00000172604 624 ntBASIC18.86■□□□□ 0.61
Snrnp40Q6PE01 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.86■□□□□ 0.61
Snrnp40Q6PE01 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snrnp40Q6PE01 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snrnp40Q6PE01 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Snrnp40Q6PE01 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snrnp40Q6PE01 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Snrnp40Q6PE01 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Snrnp40Q6PE01 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Snrnp40Q6PE01 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Snrnp40Q6PE01 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Snrnp40Q6PE01 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snrnp40Q6PE01 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.84■□□□□ 0.61
Snrnp40Q6PE01 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Snrnp40Q6PE01 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snrnp40Q6PE01 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snrnp40Q6PE01 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.84■□□□□ 0.61
Snrnp40Q6PE01 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Snrnp40Q6PE01 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snrnp40Q6PE01 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snrnp40Q6PE01 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snrnp40Q6PE01 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Snrnp40Q6PE01 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snrnp40Q6PE01 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snrnp40Q6PE01 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Snrnp40Q6PE01 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Snrnp40Q6PE01 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Snrnp40Q6PE01 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.83■□□□□ 0.61
Snrnp40Q6PE01 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms