Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
Abcf1Q6P542 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Abcf1Q6P542 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Abcf1Q6P542 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.76■■□□□ 1.39
Abcf1Q6P542 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Abcf1Q6P542 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Abcf1Q6P542 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Abcf1Q6P542 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Abcf1Q6P542 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
Abcf1Q6P542 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC23.76■■□□□ 1.39
Abcf1Q6P542 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Abcf1Q6P542 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Abcf1Q6P542 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Abcf1Q6P542 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.74■■□□□ 1.39
Abcf1Q6P542 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Abcf1Q6P542 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.74■■□□□ 1.39
Abcf1Q6P542 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Abcf1Q6P542 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Abcf1Q6P542 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Abcf1Q6P542 Gm44428-201ENSMUST00000204474 874 ntBASIC23.73■■□□□ 1.39
Abcf1Q6P542 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Abcf1Q6P542 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Abcf1Q6P542 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Abcf1Q6P542 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Abcf1Q6P542 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC23.72■■□□□ 1.39
Abcf1Q6P542 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Abcf1Q6P542 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Abcf1Q6P542 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Abcf1Q6P542 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Abcf1Q6P542 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Abcf1Q6P542 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Abcf1Q6P542 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Abcf1Q6P542 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Abcf1Q6P542 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Abcf1Q6P542 Gm42418-201ENSMUST00000182010 1831 ntBASIC23.71■■□□□ 1.39
Abcf1Q6P542 Gm14523-201ENSMUST00000117260 558 ntBASIC23.71■■□□□ 1.39
Abcf1Q6P542 Gm7332-201ENSMUST00000118351 454 ntBASIC23.71■■□□□ 1.39
Abcf1Q6P542 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Abcf1Q6P542 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Abcf1Q6P542 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Abcf1Q6P542 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Abcf1Q6P542 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Abcf1Q6P542 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Abcf1Q6P542 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.7■■□□□ 1.38
Abcf1Q6P542 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.7■■□□□ 1.38
Abcf1Q6P542 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Abcf1Q6P542 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Abcf1Q6P542 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Abcf1Q6P542 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Abcf1Q6P542 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Abcf1Q6P542 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC23.69■■□□□ 1.38
Abcf1Q6P542 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Abcf1Q6P542 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Abcf1Q6P542 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Abcf1Q6P542 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Abcf1Q6P542 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Abcf1Q6P542 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.69■■□□□ 1.38
Abcf1Q6P542 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Abcf1Q6P542 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Abcf1Q6P542 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Abcf1Q6P542 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Abcf1Q6P542 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Abcf1Q6P542 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Abcf1Q6P542 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Abcf1Q6P542 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Abcf1Q6P542 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Abcf1Q6P542 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC23.67■■□□□ 1.38
Abcf1Q6P542 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Abcf1Q6P542 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Abcf1Q6P542 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC23.67■■□□□ 1.38
Abcf1Q6P542 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Abcf1Q6P542 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Abcf1Q6P542 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Abcf1Q6P542 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Abcf1Q6P542 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.65■■□□□ 1.38
Abcf1Q6P542 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.65■■□□□ 1.38
Abcf1Q6P542 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Abcf1Q6P542 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Abcf1Q6P542 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Abcf1Q6P542 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Abcf1Q6P542 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
Abcf1Q6P542 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Abcf1Q6P542 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Abcf1Q6P542 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Abcf1Q6P542 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Abcf1Q6P542 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Abcf1Q6P542 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Abcf1Q6P542 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Abcf1Q6P542 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.63■■□□□ 1.37
Abcf1Q6P542 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.63■■□□□ 1.37
Abcf1Q6P542 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Abcf1Q6P542 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Abcf1Q6P542 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Abcf1Q6P542 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Abcf1Q6P542 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
Abcf1Q6P542 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Abcf1Q6P542 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.62■■□□□ 1.37
Abcf1Q6P542 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.61■■□□□ 1.37
Abcf1Q6P542 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.61■■□□□ 1.37
Abcf1Q6P542 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms