Protein–RNA interactions for Protein: Q61909

Runx1t1, Protein CBFA2T1, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Runx1t1Q61909 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Runx1t1Q61909 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Runx1t1Q61909 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Runx1t1Q61909 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
Runx1t1Q61909 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Runx1t1Q61909 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Runx1t1Q61909 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Runx1t1Q61909 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Runx1t1Q61909 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Runx1t1Q61909 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Runx1t1Q61909 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Runx1t1Q61909 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Runx1t1Q61909 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Runx1t1Q61909 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Runx1t1Q61909 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.22■□□□□ 0.83
Runx1t1Q61909 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Runx1t1Q61909 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Runx1t1Q61909 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Runx1t1Q61909 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Runx1t1Q61909 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Runx1t1Q61909 Gm22567-201ENSMUST00000175542 342 ntBASIC20.21■□□□□ 0.83
Runx1t1Q61909 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.21■□□□□ 0.83
Runx1t1Q61909 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Runx1t1Q61909 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Runx1t1Q61909 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Runx1t1Q61909 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Runx1t1Q61909 Gm14523-201ENSMUST00000117260 558 ntBASIC20.2■□□□□ 0.82
Runx1t1Q61909 Mir6538-201ENSMUST00000183713 110 ntBASIC20.2■□□□□ 0.82
Runx1t1Q61909 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Runx1t1Q61909 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Runx1t1Q61909 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Runx1t1Q61909 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.19■□□□□ 0.82
Runx1t1Q61909 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Runx1t1Q61909 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Runx1t1Q61909 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Runx1t1Q61909 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Runx1t1Q61909 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Runx1t1Q61909 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Runx1t1Q61909 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Runx1t1Q61909 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Runx1t1Q61909 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Runx1t1Q61909 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Runx1t1Q61909 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Runx1t1Q61909 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Runx1t1Q61909 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Runx1t1Q61909 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Runx1t1Q61909 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Runx1t1Q61909 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.17■□□□□ 0.82
Runx1t1Q61909 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Runx1t1Q61909 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Runx1t1Q61909 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Runx1t1Q61909 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Runx1t1Q61909 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.16■□□□□ 0.82
Runx1t1Q61909 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Runx1t1Q61909 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Runx1t1Q61909 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Runx1t1Q61909 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.16■□□□□ 0.82
Runx1t1Q61909 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.16■□□□□ 0.82
Runx1t1Q61909 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Runx1t1Q61909 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Runx1t1Q61909 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Runx1t1Q61909 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Runx1t1Q61909 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Runx1t1Q61909 Gm7332-201ENSMUST00000118351 454 ntBASIC20.15■□□□□ 0.82
Runx1t1Q61909 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.15■□□□□ 0.82
Runx1t1Q61909 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Runx1t1Q61909 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Runx1t1Q61909 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.15■□□□□ 0.82
Runx1t1Q61909 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Runx1t1Q61909 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
Runx1t1Q61909 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Runx1t1Q61909 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Runx1t1Q61909 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Runx1t1Q61909 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.14■□□□□ 0.81
Runx1t1Q61909 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Runx1t1Q61909 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.13■□□□□ 0.81
Runx1t1Q61909 Gm12366-201ENSMUST00000121722 873 ntBASIC20.13■□□□□ 0.81
Runx1t1Q61909 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.13■□□□□ 0.81
Runx1t1Q61909 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.13■□□□□ 0.81
Runx1t1Q61909 Gm5786-201ENSMUST00000085368 882 ntBASIC20.13■□□□□ 0.81
Runx1t1Q61909 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Runx1t1Q61909 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Runx1t1Q61909 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Runx1t1Q61909 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Runx1t1Q61909 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Runx1t1Q61909 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Runx1t1Q61909 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Runx1t1Q61909 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Runx1t1Q61909 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Runx1t1Q61909 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Runx1t1Q61909 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Runx1t1Q61909 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Runx1t1Q61909 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Runx1t1Q61909 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Runx1t1Q61909 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.12■□□□□ 0.81
Runx1t1Q61909 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Runx1t1Q61909 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Runx1t1Q61909 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Runx1t1Q61909 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Runx1t1Q61909 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms