Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vsx2Q61412 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vsx2Q61412 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vsx2Q61412 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Vsx2Q61412 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vsx2Q61412 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vsx2Q61412 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vsx2Q61412 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Vsx2Q61412 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vsx2Q61412 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vsx2Q61412 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.66■□□□□ 0.9
Vsx2Q61412 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.66■□□□□ 0.9
Vsx2Q61412 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Vsx2Q61412 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.66■□□□□ 0.9
Vsx2Q61412 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vsx2Q61412 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.66■□□□□ 0.9
Vsx2Q61412 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vsx2Q61412 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vsx2Q61412 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Vsx2Q61412 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Vsx2Q61412 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vsx2Q61412 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vsx2Q61412 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Vsx2Q61412 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Vsx2Q61412 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vsx2Q61412 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vsx2Q61412 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vsx2Q61412 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.64■□□□□ 0.89
Vsx2Q61412 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Vsx2Q61412 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vsx2Q61412 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vsx2Q61412 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vsx2Q61412 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vsx2Q61412 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vsx2Q61412 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vsx2Q61412 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vsx2Q61412 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vsx2Q61412 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Vsx2Q61412 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.61■□□□□ 0.89
Vsx2Q61412 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vsx2Q61412 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vsx2Q61412 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vsx2Q61412 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.6■□□□□ 0.89
Vsx2Q61412 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vsx2Q61412 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vsx2Q61412 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vsx2Q61412 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Vsx2Q61412 Gm45444-201ENSMUST00000211394 898 ntBASIC20.6■□□□□ 0.89
Vsx2Q61412 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vsx2Q61412 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vsx2Q61412 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vsx2Q61412 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.6■□□□□ 0.89
Vsx2Q61412 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Vsx2Q61412 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vsx2Q61412 Gm13238-201ENSMUST00000117655 780 ntBASIC20.59■□□□□ 0.89
Vsx2Q61412 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Vsx2Q61412 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Vsx2Q61412 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vsx2Q61412 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vsx2Q61412 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Vsx2Q61412 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vsx2Q61412 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vsx2Q61412 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vsx2Q61412 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.58■□□□□ 0.89
Vsx2Q61412 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vsx2Q61412 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Vsx2Q61412 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vsx2Q61412 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vsx2Q61412 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Vsx2Q61412 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vsx2Q61412 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vsx2Q61412 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vsx2Q61412 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vsx2Q61412 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vsx2Q61412 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vsx2Q61412 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vsx2Q61412 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Vsx2Q61412 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.57■□□□□ 0.88
Vsx2Q61412 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vsx2Q61412 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.56■□□□□ 0.88
Vsx2Q61412 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Vsx2Q61412 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vsx2Q61412 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vsx2Q61412 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.56■□□□□ 0.88
Vsx2Q61412 Gm43566-201ENSMUST00000196851 808 ntBASIC20.56■□□□□ 0.88
Vsx2Q61412 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vsx2Q61412 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vsx2Q61412 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vsx2Q61412 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vsx2Q61412 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vsx2Q61412 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vsx2Q61412 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vsx2Q61412 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vsx2Q61412 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Vsx2Q61412 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vsx2Q61412 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.54■□□□□ 0.88
Vsx2Q61412 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vsx2Q61412 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vsx2Q61412 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Vsx2Q61412 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms