Protein–RNA interactions for Protein: Q61056

Trpc1, Short transient receptor potential channel 1, mousemouse

Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpc1Q61056 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trpc1Q61056 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trpc1Q61056 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trpc1Q61056 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trpc1Q61056 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trpc1Q61056 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trpc1Q61056 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Trpc1Q61056 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trpc1Q61056 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trpc1Q61056 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trpc1Q61056 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Trpc1Q61056 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trpc1Q61056 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trpc1Q61056 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpc1Q61056 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpc1Q61056 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpc1Q61056 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.61■□□□□ 0.89
Trpc1Q61056 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.61■□□□□ 0.89
Trpc1Q61056 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpc1Q61056 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.61■□□□□ 0.89
Trpc1Q61056 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
Trpc1Q61056 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Trpc1Q61056 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.6■□□□□ 0.89
Trpc1Q61056 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpc1Q61056 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpc1Q61056 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Trpc1Q61056 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trpc1Q61056 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.6■□□□□ 0.89
Trpc1Q61056 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpc1Q61056 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Trpc1Q61056 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpc1Q61056 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpc1Q61056 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.59■□□□□ 0.89
Trpc1Q61056 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpc1Q61056 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpc1Q61056 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpc1Q61056 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Trpc1Q61056 Gm44428-201ENSMUST00000204474 874 ntBASIC20.58■□□□□ 0.89
Trpc1Q61056 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trpc1Q61056 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trpc1Q61056 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Trpc1Q61056 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trpc1Q61056 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trpc1Q61056 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trpc1Q61056 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.57■□□□□ 0.88
Trpc1Q61056 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trpc1Q61056 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.57■□□□□ 0.88
Trpc1Q61056 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trpc1Q61056 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.56■□□□□ 0.88
Trpc1Q61056 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.56■□□□□ 0.88
Trpc1Q61056 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Trpc1Q61056 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trpc1Q61056 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.56■□□□□ 0.88
Trpc1Q61056 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trpc1Q61056 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trpc1Q61056 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.55■□□□□ 0.88
Trpc1Q61056 Gm27502-201ENSMUST00000183495 199 ntBASIC20.55■□□□□ 0.88
Trpc1Q61056 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trpc1Q61056 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trpc1Q61056 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trpc1Q61056 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Trpc1Q61056 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.54■□□□□ 0.88
Trpc1Q61056 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trpc1Q61056 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trpc1Q61056 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trpc1Q61056 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trpc1Q61056 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.53■□□□□ 0.88
Trpc1Q61056 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trpc1Q61056 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.53■□□□□ 0.88
Trpc1Q61056 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Trpc1Q61056 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trpc1Q61056 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trpc1Q61056 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.52■□□□□ 0.88
Trpc1Q61056 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trpc1Q61056 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.52■□□□□ 0.88
Trpc1Q61056 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trpc1Q61056 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trpc1Q61056 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Trpc1Q61056 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trpc1Q61056 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trpc1Q61056 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trpc1Q61056 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Trpc1Q61056 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.51■□□□□ 0.87
Trpc1Q61056 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trpc1Q61056 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Trpc1Q61056 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Trpc1Q61056 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Trpc1Q61056 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trpc1Q61056 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trpc1Q61056 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trpc1Q61056 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.5■□□□□ 0.87
Trpc1Q61056 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.5■□□□□ 0.87
Trpc1Q61056 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trpc1Q61056 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Trpc1Q61056 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trpc1Q61056 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Trpc1Q61056 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trpc1Q61056 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Trpc1Q61056 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.49■□□□□ 0.87
Trpc1Q61056 Gm12366-201ENSMUST00000121722 873 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms