Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ClpbQ60649 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ClpbQ60649 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ClpbQ60649 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ClpbQ60649 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ClpbQ60649 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ClpbQ60649 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
ClpbQ60649 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ClpbQ60649 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ClpbQ60649 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ClpbQ60649 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ClpbQ60649 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.37■□□□□ 0.85
ClpbQ60649 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ClpbQ60649 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.37■□□□□ 0.85
ClpbQ60649 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ClpbQ60649 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
ClpbQ60649 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ClpbQ60649 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ClpbQ60649 Gm43566-201ENSMUST00000196851 808 ntBASIC20.37■□□□□ 0.85
ClpbQ60649 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ClpbQ60649 Gm5812-201ENSMUST00000061073 957 ntBASIC20.37■□□□□ 0.85
ClpbQ60649 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ClpbQ60649 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
ClpbQ60649 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ClpbQ60649 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ClpbQ60649 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ClpbQ60649 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ClpbQ60649 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ClpbQ60649 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
ClpbQ60649 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ClpbQ60649 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ClpbQ60649 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
ClpbQ60649 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
ClpbQ60649 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ClpbQ60649 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ClpbQ60649 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ClpbQ60649 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.35■□□□□ 0.85
ClpbQ60649 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ClpbQ60649 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ClpbQ60649 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ClpbQ60649 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
ClpbQ60649 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ClpbQ60649 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ClpbQ60649 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ClpbQ60649 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ClpbQ60649 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ClpbQ60649 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ClpbQ60649 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
ClpbQ60649 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ClpbQ60649 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ClpbQ60649 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ClpbQ60649 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ClpbQ60649 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ClpbQ60649 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.33■□□□□ 0.85
ClpbQ60649 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
ClpbQ60649 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ClpbQ60649 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
ClpbQ60649 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.33■□□□□ 0.84
ClpbQ60649 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ClpbQ60649 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.32■□□□□ 0.84
ClpbQ60649 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.32■□□□□ 0.84
ClpbQ60649 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ClpbQ60649 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ClpbQ60649 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.32■□□□□ 0.84
ClpbQ60649 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.32■□□□□ 0.84
ClpbQ60649 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ClpbQ60649 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ClpbQ60649 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
ClpbQ60649 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ClpbQ60649 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ClpbQ60649 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ClpbQ60649 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ClpbQ60649 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ClpbQ60649 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.3■□□□□ 0.84
ClpbQ60649 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ClpbQ60649 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ClpbQ60649 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ClpbQ60649 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.3■□□□□ 0.84
ClpbQ60649 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ClpbQ60649 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ClpbQ60649 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.29■□□□□ 0.84
ClpbQ60649 Gm13238-201ENSMUST00000117655 780 ntBASIC20.29■□□□□ 0.84
ClpbQ60649 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ClpbQ60649 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.28■□□□□ 0.84
ClpbQ60649 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ClpbQ60649 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ClpbQ60649 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ClpbQ60649 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ClpbQ60649 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ClpbQ60649 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ClpbQ60649 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ClpbQ60649 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ClpbQ60649 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ClpbQ60649 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ClpbQ60649 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ClpbQ60649 Gm15546-201ENSMUST00000122095 826 ntBASIC20.27■□□□□ 0.84
ClpbQ60649 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ClpbQ60649 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ClpbQ60649 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ClpbQ60649 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms