Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vmn1r223Q5SSA0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vmn1r223Q5SSA0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.48■□□□□ 0.55
Vmn1r223Q5SSA0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.48■□□□□ 0.55
Vmn1r223Q5SSA0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Vmn1r223Q5SSA0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vmn1r223Q5SSA0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vmn1r223Q5SSA0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vmn1r223Q5SSA0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vmn1r223Q5SSA0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.47■□□□□ 0.55
Vmn1r223Q5SSA0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vmn1r223Q5SSA0 Cap2-205ENSMUST00000225824 1634 ntBASIC18.47■□□□□ 0.55
Vmn1r223Q5SSA0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.47■□□□□ 0.55
Vmn1r223Q5SSA0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vmn1r223Q5SSA0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vmn1r223Q5SSA0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.46■□□□□ 0.55
Vmn1r223Q5SSA0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vmn1r223Q5SSA0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vmn1r223Q5SSA0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vmn1r223Q5SSA0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Vmn1r223Q5SSA0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vmn1r223Q5SSA0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.46■□□□□ 0.55
Vmn1r223Q5SSA0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Vmn1r223Q5SSA0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vmn1r223Q5SSA0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vmn1r223Q5SSA0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Vmn1r223Q5SSA0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Vmn1r223Q5SSA0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Vmn1r223Q5SSA0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vmn1r223Q5SSA0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vmn1r223Q5SSA0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vmn1r223Q5SSA0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.45■□□□□ 0.54
Vmn1r223Q5SSA0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vmn1r223Q5SSA0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Vmn1r223Q5SSA0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vmn1r223Q5SSA0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vmn1r223Q5SSA0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vmn1r223Q5SSA0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vmn1r223Q5SSA0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vmn1r223Q5SSA0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vmn1r223Q5SSA0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.44■□□□□ 0.54
Vmn1r223Q5SSA0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.44■□□□□ 0.54
Vmn1r223Q5SSA0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vmn1r223Q5SSA0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vmn1r223Q5SSA0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vmn1r223Q5SSA0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.44■□□□□ 0.54
Vmn1r223Q5SSA0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vmn1r223Q5SSA0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vmn1r223Q5SSA0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vmn1r223Q5SSA0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.44■□□□□ 0.54
Vmn1r223Q5SSA0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vmn1r223Q5SSA0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.43■□□□□ 0.54
Vmn1r223Q5SSA0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vmn1r223Q5SSA0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vmn1r223Q5SSA0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.43■□□□□ 0.54
Vmn1r223Q5SSA0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vmn1r223Q5SSA0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vmn1r223Q5SSA0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vmn1r223Q5SSA0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Vmn1r223Q5SSA0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.42■□□□□ 0.54
Vmn1r223Q5SSA0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vmn1r223Q5SSA0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Vmn1r223Q5SSA0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vmn1r223Q5SSA0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vmn1r223Q5SSA0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.41■□□□□ 0.54
Vmn1r223Q5SSA0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Vmn1r223Q5SSA0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Vmn1r223Q5SSA0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vmn1r223Q5SSA0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.41■□□□□ 0.54
Vmn1r223Q5SSA0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Vmn1r223Q5SSA0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vmn1r223Q5SSA0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.41■□□□□ 0.54
Vmn1r223Q5SSA0 Gm12366-201ENSMUST00000121722 873 ntBASIC18.41■□□□□ 0.54
Vmn1r223Q5SSA0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.41■□□□□ 0.54
Vmn1r223Q5SSA0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vmn1r223Q5SSA0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vmn1r223Q5SSA0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.41■□□□□ 0.54
Vmn1r223Q5SSA0 Gm5786-201ENSMUST00000085368 882 ntBASIC18.41■□□□□ 0.54
Vmn1r223Q5SSA0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vmn1r223Q5SSA0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vmn1r223Q5SSA0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Vmn1r223Q5SSA0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vmn1r223Q5SSA0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.4■□□□□ 0.54
Vmn1r223Q5SSA0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vmn1r223Q5SSA0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vmn1r223Q5SSA0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vmn1r223Q5SSA0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Vmn1r223Q5SSA0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Vmn1r223Q5SSA0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Vmn1r223Q5SSA0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vmn1r223Q5SSA0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vmn1r223Q5SSA0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Vmn1r223Q5SSA0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.39■□□□□ 0.53
Vmn1r223Q5SSA0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.39■□□□□ 0.53
Vmn1r223Q5SSA0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Vmn1r223Q5SSA0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vmn1r223Q5SSA0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vmn1r223Q5SSA0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r223Q5SSA0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r223Q5SSA0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms