Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.1■□□□□ 0.97
Trav8d-2Q5R1B6 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Trav8d-2Q5R1B6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trav8d-2Q5R1B6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trav8d-2Q5R1B6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Trav8d-2Q5R1B6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Trav8d-2Q5R1B6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trav8d-2Q5R1B6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trav8d-2Q5R1B6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.09■□□□□ 0.97
Trav8d-2Q5R1B6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Trav8d-2Q5R1B6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
Trav8d-2Q5R1B6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trav8d-2Q5R1B6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trav8d-2Q5R1B6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trav8d-2Q5R1B6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.08■□□□□ 0.97
Trav8d-2Q5R1B6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trav8d-2Q5R1B6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trav8d-2Q5R1B6 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav8d-2Q5R1B6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.07■□□□□ 0.96
Trav8d-2Q5R1B6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.07■□□□□ 0.96
Trav8d-2Q5R1B6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav8d-2Q5R1B6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Trav8d-2Q5R1B6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav8d-2Q5R1B6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trav8d-2Q5R1B6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trav8d-2Q5R1B6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trav8d-2Q5R1B6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trav8d-2Q5R1B6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trav8d-2Q5R1B6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trav8d-2Q5R1B6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trav8d-2Q5R1B6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.05■□□□□ 0.96
Trav8d-2Q5R1B6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
Trav8d-2Q5R1B6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trav8d-2Q5R1B6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trav8d-2Q5R1B6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trav8d-2Q5R1B6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
Trav8d-2Q5R1B6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trav8d-2Q5R1B6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trav8d-2Q5R1B6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trav8d-2Q5R1B6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
Trav8d-2Q5R1B6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trav8d-2Q5R1B6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav8d-2Q5R1B6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav8d-2Q5R1B6 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.03■□□□□ 0.96
Trav8d-2Q5R1B6 Gm6139-201ENSMUST00000079261 882 ntBASIC21.03■□□□□ 0.96
Trav8d-2Q5R1B6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav8d-2Q5R1B6 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.02■□□□□ 0.96
Trav8d-2Q5R1B6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav8d-2Q5R1B6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav8d-2Q5R1B6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav8d-2Q5R1B6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.02■□□□□ 0.96
Trav8d-2Q5R1B6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trav8d-2Q5R1B6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Trav8d-2Q5R1B6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav8d-2Q5R1B6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.02■□□□□ 0.96
Trav8d-2Q5R1B6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav8d-2Q5R1B6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav8d-2Q5R1B6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav8d-2Q5R1B6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Trav8d-2Q5R1B6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Trav8d-2Q5R1B6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trav8d-2Q5R1B6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav8d-2Q5R1B6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav8d-2Q5R1B6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Trav8d-2Q5R1B6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trav8d-2Q5R1B6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trav8d-2Q5R1B6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trav8d-2Q5R1B6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trav8d-2Q5R1B6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21■□□□□ 0.95
Trav8d-2Q5R1B6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21■□□□□ 0.95
Trav8d-2Q5R1B6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Trav8d-2Q5R1B6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trav8d-2Q5R1B6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav8d-2Q5R1B6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav8d-2Q5R1B6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav8d-2Q5R1B6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Trav8d-2Q5R1B6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trav8d-2Q5R1B6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.99■□□□□ 0.95
Trav8d-2Q5R1B6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Trav8d-2Q5R1B6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.98■□□□□ 0.95
Trav8d-2Q5R1B6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trav8d-2Q5R1B6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trav8d-2Q5R1B6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.98■□□□□ 0.95
Trav8d-2Q5R1B6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Trav8d-2Q5R1B6 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.98■□□□□ 0.95
Trav8d-2Q5R1B6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.98■□□□□ 0.95
Trav8d-2Q5R1B6 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trav8d-2Q5R1B6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Trav8d-2Q5R1B6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav8d-2Q5R1B6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.97■□□□□ 0.95
Trav8d-2Q5R1B6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.97■□□□□ 0.95
Trav8d-2Q5R1B6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Trav8d-2Q5R1B6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav8d-2Q5R1B6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trav8d-2Q5R1B6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav8d-2Q5R1B6 Gm9870-201ENSMUST00000063874 645 ntBASIC20.97■□□□□ 0.95
Trav8d-2Q5R1B6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav8d-2Q5R1B6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.96■□□□□ 0.95
Trav8d-2Q5R1B6 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Trav8d-2Q5R1B6 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 201.9 ms