Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.79■■□□□ 1.08
Rnf43Q5NCP0 Gm27454-201ENSMUST00000185090 204 ntBASIC21.79■■□□□ 1.08
Rnf43Q5NCP0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf43Q5NCP0 Golgb1-201ENSMUST00000023534 498 ntBASIC21.79■■□□□ 1.08
Rnf43Q5NCP0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf43Q5NCP0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.79■■□□□ 1.08
Rnf43Q5NCP0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf43Q5NCP0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rnf43Q5NCP0 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.78■■□□□ 1.08
Rnf43Q5NCP0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rnf43Q5NCP0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rnf43Q5NCP0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.78■■□□□ 1.08
Rnf43Q5NCP0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.78■■□□□ 1.08
Rnf43Q5NCP0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf43Q5NCP0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf43Q5NCP0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf43Q5NCP0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf43Q5NCP0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.77■■□□□ 1.08
Rnf43Q5NCP0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.77■■□□□ 1.08
Rnf43Q5NCP0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
Rnf43Q5NCP0 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.77■■□□□ 1.08
Rnf43Q5NCP0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf43Q5NCP0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf43Q5NCP0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Rnf43Q5NCP0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Rnf43Q5NCP0 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.76■■□□□ 1.07
Rnf43Q5NCP0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf43Q5NCP0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf43Q5NCP0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Rnf43Q5NCP0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf43Q5NCP0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf43Q5NCP0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf43Q5NCP0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf43Q5NCP0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Rnf43Q5NCP0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf43Q5NCP0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf43Q5NCP0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf43Q5NCP0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Rnf43Q5NCP0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.75■■□□□ 1.07
Rnf43Q5NCP0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf43Q5NCP0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf43Q5NCP0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Rnf43Q5NCP0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.74■■□□□ 1.07
Rnf43Q5NCP0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf43Q5NCP0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf43Q5NCP0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf43Q5NCP0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf43Q5NCP0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Rnf43Q5NCP0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf43Q5NCP0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.73■■□□□ 1.07
Rnf43Q5NCP0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf43Q5NCP0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf43Q5NCP0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf43Q5NCP0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.73■■□□□ 1.07
Rnf43Q5NCP0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.73■■□□□ 1.07
Rnf43Q5NCP0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Rnf43Q5NCP0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf43Q5NCP0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.73■■□□□ 1.07
Rnf43Q5NCP0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf43Q5NCP0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf43Q5NCP0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf43Q5NCP0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.72■■□□□ 1.07
Rnf43Q5NCP0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
Rnf43Q5NCP0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.72■■□□□ 1.07
Rnf43Q5NCP0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf43Q5NCP0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf43Q5NCP0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf43Q5NCP0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.71■■□□□ 1.07
Rnf43Q5NCP0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf43Q5NCP0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf43Q5NCP0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf43Q5NCP0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Rnf43Q5NCP0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf43Q5NCP0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf43Q5NCP0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf43Q5NCP0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf43Q5NCP0 Gm45417-201ENSMUST00000209533 758 ntBASIC21.7■■□□□ 1.06
Rnf43Q5NCP0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf43Q5NCP0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf43Q5NCP0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Rnf43Q5NCP0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf43Q5NCP0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf43Q5NCP0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf43Q5NCP0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf43Q5NCP0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf43Q5NCP0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf43Q5NCP0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Rnf43Q5NCP0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Rnf43Q5NCP0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf43Q5NCP0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf43Q5NCP0 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.67■■□□□ 1.06
Rnf43Q5NCP0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
Rnf43Q5NCP0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Rnf43Q5NCP0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf43Q5NCP0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf43Q5NCP0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Rnf43Q5NCP0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Rnf43Q5NCP0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.65■■□□□ 1.06
Rnf43Q5NCP0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf43Q5NCP0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms