Protein–RNA interactions for Protein: Q571G4

Lin54, Protein lin-54 homolog, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin54Q571G4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lin54Q571G4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Lin54Q571G4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lin54Q571G4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lin54Q571G4 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.31■□□□□ 0.52
Lin54Q571G4 Gm22567-201ENSMUST00000175542 342 ntBASIC18.31■□□□□ 0.52
Lin54Q571G4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.31■□□□□ 0.52
Lin54Q571G4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lin54Q571G4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lin54Q571G4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lin54Q571G4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lin54Q571G4 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.3■□□□□ 0.52
Lin54Q571G4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lin54Q571G4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lin54Q571G4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Lin54Q571G4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lin54Q571G4 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.3■□□□□ 0.52
Lin54Q571G4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lin54Q571G4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.3■□□□□ 0.52
Lin54Q571G4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lin54Q571G4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lin54Q571G4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.3■□□□□ 0.52
Lin54Q571G4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.3■□□□□ 0.52
Lin54Q571G4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lin54Q571G4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lin54Q571G4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Lin54Q571G4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.3■□□□□ 0.52
Lin54Q571G4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Lin54Q571G4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lin54Q571G4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Lin54Q571G4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.29■□□□□ 0.52
Lin54Q571G4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Lin54Q571G4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Lin54Q571G4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lin54Q571G4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lin54Q571G4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lin54Q571G4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lin54Q571G4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lin54Q571G4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lin54Q571G4 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.28■□□□□ 0.52
Lin54Q571G4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.28■□□□□ 0.52
Lin54Q571G4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lin54Q571G4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lin54Q571G4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lin54Q571G4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lin54Q571G4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Lin54Q571G4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.28■□□□□ 0.52
Lin54Q571G4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lin54Q571G4 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.27■□□□□ 0.52
Lin54Q571G4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lin54Q571G4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lin54Q571G4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Lin54Q571G4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Lin54Q571G4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Lin54Q571G4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lin54Q571G4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lin54Q571G4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lin54Q571G4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lin54Q571G4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lin54Q571G4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lin54Q571G4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.26■□□□□ 0.51
Lin54Q571G4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Lin54Q571G4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
Lin54Q571G4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Lin54Q571G4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lin54Q571G4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lin54Q571G4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lin54Q571G4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lin54Q571G4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.25■□□□□ 0.51
Lin54Q571G4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lin54Q571G4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Lin54Q571G4 Gm9812-201ENSMUST00000061934 968 ntBASIC18.25■□□□□ 0.51
Lin54Q571G4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Lin54Q571G4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lin54Q571G4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lin54Q571G4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lin54Q571G4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lin54Q571G4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lin54Q571G4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lin54Q571G4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lin54Q571G4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lin54Q571G4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lin54Q571G4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.24■□□□□ 0.51
Lin54Q571G4 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.24■□□□□ 0.51
Lin54Q571G4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Lin54Q571G4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lin54Q571G4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lin54Q571G4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lin54Q571G4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.23■□□□□ 0.51
Lin54Q571G4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lin54Q571G4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.23■□□□□ 0.51
Lin54Q571G4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Lin54Q571G4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lin54Q571G4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lin54Q571G4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lin54Q571G4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lin54Q571G4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lin54Q571G4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.21■□□□□ 0.51
Lin54Q571G4 Terc-201ENSMUST00000082862 423 ntBASIC18.21■□□□□ 0.51
Lin54Q571G4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms