Protein–RNA interactions for Protein: Q3UWL8

Pfdn4, Prefoldin subunit 4, mousemouse

Predictions only

Length 134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn4Q3UWL8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pfdn4Q3UWL8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Pfdn4Q3UWL8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Pfdn4Q3UWL8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pfdn4Q3UWL8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pfdn4Q3UWL8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pfdn4Q3UWL8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pfdn4Q3UWL8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Pfdn4Q3UWL8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pfdn4Q3UWL8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pfdn4Q3UWL8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pfdn4Q3UWL8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pfdn4Q3UWL8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Pfdn4Q3UWL8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Pfdn4Q3UWL8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Pfdn4Q3UWL8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Pfdn4Q3UWL8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pfdn4Q3UWL8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pfdn4Q3UWL8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.72■□□□□ 0.91
Pfdn4Q3UWL8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pfdn4Q3UWL8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pfdn4Q3UWL8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.71■□□□□ 0.91
Pfdn4Q3UWL8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pfdn4Q3UWL8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pfdn4Q3UWL8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Pfdn4Q3UWL8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pfdn4Q3UWL8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pfdn4Q3UWL8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pfdn4Q3UWL8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pfdn4Q3UWL8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pfdn4Q3UWL8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Pfdn4Q3UWL8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pfdn4Q3UWL8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.7■□□□□ 0.9
Pfdn4Q3UWL8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Pfdn4Q3UWL8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pfdn4Q3UWL8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pfdn4Q3UWL8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.69■□□□□ 0.9
Pfdn4Q3UWL8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.69■□□□□ 0.9
Pfdn4Q3UWL8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Pfdn4Q3UWL8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.69■□□□□ 0.9
Pfdn4Q3UWL8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pfdn4Q3UWL8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pfdn4Q3UWL8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pfdn4Q3UWL8 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.68■□□□□ 0.9
Pfdn4Q3UWL8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pfdn4Q3UWL8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.68■□□□□ 0.9
Pfdn4Q3UWL8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pfdn4Q3UWL8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pfdn4Q3UWL8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pfdn4Q3UWL8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pfdn4Q3UWL8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pfdn4Q3UWL8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pfdn4Q3UWL8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Pfdn4Q3UWL8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pfdn4Q3UWL8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pfdn4Q3UWL8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pfdn4Q3UWL8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pfdn4Q3UWL8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Pfdn4Q3UWL8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.67■□□□□ 0.9
Pfdn4Q3UWL8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pfdn4Q3UWL8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Pfdn4Q3UWL8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.67■□□□□ 0.9
Pfdn4Q3UWL8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pfdn4Q3UWL8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pfdn4Q3UWL8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pfdn4Q3UWL8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Pfdn4Q3UWL8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.66■□□□□ 0.9
Pfdn4Q3UWL8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
Pfdn4Q3UWL8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pfdn4Q3UWL8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Pfdn4Q3UWL8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Pfdn4Q3UWL8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pfdn4Q3UWL8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Pfdn4Q3UWL8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pfdn4Q3UWL8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pfdn4Q3UWL8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pfdn4Q3UWL8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Pfdn4Q3UWL8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Pfdn4Q3UWL8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pfdn4Q3UWL8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pfdn4Q3UWL8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.65■□□□□ 0.9
Pfdn4Q3UWL8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Pfdn4Q3UWL8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pfdn4Q3UWL8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Pfdn4Q3UWL8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pfdn4Q3UWL8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pfdn4Q3UWL8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.64■□□□□ 0.9
Pfdn4Q3UWL8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Pfdn4Q3UWL8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Pfdn4Q3UWL8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Pfdn4Q3UWL8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.64■□□□□ 0.89
Pfdn4Q3UWL8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pfdn4Q3UWL8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.64■□□□□ 0.89
Pfdn4Q3UWL8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pfdn4Q3UWL8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pfdn4Q3UWL8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pfdn4Q3UWL8 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.63■□□□□ 0.89
Pfdn4Q3UWL8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pfdn4Q3UWL8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pfdn4Q3UWL8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms