Protein–RNA interactions for Protein: Q3TFD2

Lpcat1, Lysophosphatidylcholine acyltransferase 1, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lpcat1Q3TFD2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Lpcat1Q3TFD2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lpcat1Q3TFD2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lpcat1Q3TFD2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lpcat1Q3TFD2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Lpcat1Q3TFD2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lpcat1Q3TFD2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lpcat1Q3TFD2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lpcat1Q3TFD2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.33■□□□□ 0.85
Lpcat1Q3TFD2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Lpcat1Q3TFD2 Gm44428-201ENSMUST00000204474 874 ntBASIC20.33■□□□□ 0.85
Lpcat1Q3TFD2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Lpcat1Q3TFD2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.33■□□□□ 0.84
Lpcat1Q3TFD2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lpcat1Q3TFD2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lpcat1Q3TFD2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Lpcat1Q3TFD2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Lpcat1Q3TFD2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lpcat1Q3TFD2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Lpcat1Q3TFD2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lpcat1Q3TFD2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lpcat1Q3TFD2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lpcat1Q3TFD2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lpcat1Q3TFD2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lpcat1Q3TFD2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Lpcat1Q3TFD2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lpcat1Q3TFD2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lpcat1Q3TFD2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lpcat1Q3TFD2 Gm11687-201ENSMUST00000118911 886 ntBASIC20.3■□□□□ 0.84
Lpcat1Q3TFD2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Lpcat1Q3TFD2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lpcat1Q3TFD2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lpcat1Q3TFD2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lpcat1Q3TFD2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.3■□□□□ 0.84
Lpcat1Q3TFD2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lpcat1Q3TFD2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lpcat1Q3TFD2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lpcat1Q3TFD2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Lpcat1Q3TFD2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lpcat1Q3TFD2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.29■□□□□ 0.84
Lpcat1Q3TFD2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lpcat1Q3TFD2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lpcat1Q3TFD2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lpcat1Q3TFD2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lpcat1Q3TFD2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Lpcat1Q3TFD2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Lpcat1Q3TFD2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Lpcat1Q3TFD2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lpcat1Q3TFD2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lpcat1Q3TFD2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Lpcat1Q3TFD2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Lpcat1Q3TFD2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Lpcat1Q3TFD2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Lpcat1Q3TFD2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.26■□□□□ 0.83
Lpcat1Q3TFD2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lpcat1Q3TFD2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lpcat1Q3TFD2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lpcat1Q3TFD2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.26■□□□□ 0.83
Lpcat1Q3TFD2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lpcat1Q3TFD2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lpcat1Q3TFD2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
Lpcat1Q3TFD2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lpcat1Q3TFD2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lpcat1Q3TFD2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.25■□□□□ 0.83
Lpcat1Q3TFD2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lpcat1Q3TFD2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Lpcat1Q3TFD2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lpcat1Q3TFD2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lpcat1Q3TFD2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Lpcat1Q3TFD2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Lpcat1Q3TFD2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.24■□□□□ 0.83
Lpcat1Q3TFD2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lpcat1Q3TFD2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lpcat1Q3TFD2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lpcat1Q3TFD2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lpcat1Q3TFD2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lpcat1Q3TFD2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lpcat1Q3TFD2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.23■□□□□ 0.83
Lpcat1Q3TFD2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.23■□□□□ 0.83
Lpcat1Q3TFD2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lpcat1Q3TFD2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lpcat1Q3TFD2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lpcat1Q3TFD2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lpcat1Q3TFD2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.22■□□□□ 0.83
Lpcat1Q3TFD2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lpcat1Q3TFD2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lpcat1Q3TFD2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lpcat1Q3TFD2 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.22■□□□□ 0.83
Lpcat1Q3TFD2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lpcat1Q3TFD2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Lpcat1Q3TFD2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lpcat1Q3TFD2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lpcat1Q3TFD2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lpcat1Q3TFD2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Lpcat1Q3TFD2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lpcat1Q3TFD2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lpcat1Q3TFD2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lpcat1Q3TFD2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Lpcat1Q3TFD2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lpcat1Q3TFD2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms