Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Trpm1Q2TV84 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
Trpm1Q2TV84 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Trpm1Q2TV84 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC31.36■■■□□ 2.61
Trpm1Q2TV84 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC31.36■■■□□ 2.61
Trpm1Q2TV84 Gm6139-201ENSMUST00000079261 882 ntBASIC31.36■■■□□ 2.61
Trpm1Q2TV84 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Trpm1Q2TV84 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
Trpm1Q2TV84 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Trpm1Q2TV84 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC31.35■■■□□ 2.61
Trpm1Q2TV84 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC31.35■■■□□ 2.61
Trpm1Q2TV84 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Trpm1Q2TV84 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC31.34■■■□□ 2.61
Trpm1Q2TV84 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC31.34■■■□□ 2.61
Trpm1Q2TV84 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Trpm1Q2TV84 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Trpm1Q2TV84 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC31.34■■■□□ 2.61
Trpm1Q2TV84 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC31.34■■■□□ 2.61
Trpm1Q2TV84 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Trpm1Q2TV84 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Trpm1Q2TV84 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC31.33■■■□□ 2.61
Trpm1Q2TV84 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Trpm1Q2TV84 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Trpm1Q2TV84 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Trpm1Q2TV84 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
Trpm1Q2TV84 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Trpm1Q2TV84 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Trpm1Q2TV84 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Trpm1Q2TV84 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC31.31■■■□□ 2.6
Trpm1Q2TV84 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
Trpm1Q2TV84 Gm43017-201ENSMUST00000198296 752 ntBASIC31.31■■■□□ 2.6
Trpm1Q2TV84 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Trpm1Q2TV84 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Trpm1Q2TV84 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
Trpm1Q2TV84 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC31.3■■■□□ 2.6
Trpm1Q2TV84 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Trpm1Q2TV84 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
Trpm1Q2TV84 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Trpm1Q2TV84 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Trpm1Q2TV84 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
Trpm1Q2TV84 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC31.28■■■□□ 2.6
Trpm1Q2TV84 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC31.28■■■□□ 2.6
Trpm1Q2TV84 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Trpm1Q2TV84 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC31.28■■■□□ 2.6
Trpm1Q2TV84 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Trpm1Q2TV84 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
Trpm1Q2TV84 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Trpm1Q2TV84 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Trpm1Q2TV84 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Trpm1Q2TV84 Gm42699-201ENSMUST00000198104 1657 ntBASIC31.26■■■□□ 2.59
Trpm1Q2TV84 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Trpm1Q2TV84 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC31.26■■■□□ 2.59
Trpm1Q2TV84 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Trpm1Q2TV84 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Trpm1Q2TV84 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Trpm1Q2TV84 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC31.26■■■□□ 2.59
Trpm1Q2TV84 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Trpm1Q2TV84 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC31.25■■■□□ 2.59
Trpm1Q2TV84 Gm29257-201ENSMUST00000186115 639 ntBASIC31.25■■■□□ 2.59
Trpm1Q2TV84 AC164629.5-201ENSMUST00000220387 632 ntBASIC31.25■■■□□ 2.59
Trpm1Q2TV84 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC31.24■■■□□ 2.59
Trpm1Q2TV84 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Trpm1Q2TV84 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Trpm1Q2TV84 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Trpm1Q2TV84 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
Trpm1Q2TV84 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Trpm1Q2TV84 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Trpm1Q2TV84 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC31.23■■■□□ 2.59
Trpm1Q2TV84 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Trpm1Q2TV84 Gm9207-201ENSMUST00000198773 1115 ntBASIC31.21■■■□□ 2.59
Trpm1Q2TV84 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Trpm1Q2TV84 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Trpm1Q2TV84 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Trpm1Q2TV84 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
Trpm1Q2TV84 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Trpm1Q2TV84 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Trpm1Q2TV84 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Trpm1Q2TV84 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Trpm1Q2TV84 Gm21168-201ENSMUST00000199646 1096 ntBASIC31.19■■■□□ 2.58
Trpm1Q2TV84 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC31.19■■■□□ 2.58
Trpm1Q2TV84 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
Trpm1Q2TV84 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Trpm1Q2TV84 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Trpm1Q2TV84 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC31.18■■■□□ 2.58
Trpm1Q2TV84 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
Trpm1Q2TV84 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Trpm1Q2TV84 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Trpm1Q2TV84 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Trpm1Q2TV84 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Trpm1Q2TV84 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Trpm1Q2TV84 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC31.16■■■□□ 2.58
Trpm1Q2TV84 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Trpm1Q2TV84 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Trpm1Q2TV84 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Trpm1Q2TV84 Gm43137-201ENSMUST00000198052 594 ntBASIC31.16■■■□□ 2.58
Trpm1Q2TV84 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
Trpm1Q2TV84 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Trpm1Q2TV84 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Trpm1Q2TV84 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Trpm1Q2TV84 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC31.15■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms