Protein–RNA interactions for Protein: Q01705

Notch1, Neurogenic locus notch homolog protein 1, mousemouse

Predictions only

Length 2,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1Q01705 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Notch1Q01705 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.6■□□□□ 0.09
Notch1Q01705 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Notch1Q01705 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Notch1Q01705 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Notch1Q01705 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Notch1Q01705 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Notch1Q01705 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Notch1Q01705 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.59■□□□□ 0.09
Notch1Q01705 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Notch1Q01705 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Notch1Q01705 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Notch1Q01705 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Notch1Q01705 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Notch1Q01705 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Notch1Q01705 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Notch1Q01705 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Notch1Q01705 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Notch1Q01705 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Notch1Q01705 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.58■□□□□ 0.08
Notch1Q01705 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
Notch1Q01705 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Notch1Q01705 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Notch1Q01705 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.57■□□□□ 0.08
Notch1Q01705 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Notch1Q01705 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Notch1Q01705 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Notch1Q01705 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Notch1Q01705 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Notch1Q01705 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Notch1Q01705 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Notch1Q01705 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Notch1Q01705 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Notch1Q01705 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Notch1Q01705 Fezf2-202ENSMUST00000224023 1917 ntBASIC15.56■□□□□ 0.08
Notch1Q01705 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Notch1Q01705 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Notch1Q01705 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Notch1Q01705 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Notch1Q01705 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Notch1Q01705 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Notch1Q01705 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Notch1Q01705 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.55■□□□□ 0.08
Notch1Q01705 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.54■□□□□ 0.08
Notch1Q01705 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Notch1Q01705 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Notch1Q01705 Gm27011-201ENSMUST00000182352 972 ntBASIC15.54■□□□□ 0.08
Notch1Q01705 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Notch1Q01705 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Notch1Q01705 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Notch1Q01705 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Notch1Q01705 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Notch1Q01705 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.53■□□□□ 0.08
Notch1Q01705 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Notch1Q01705 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Notch1Q01705 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Notch1Q01705 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Notch1Q01705 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.52■□□□□ 0.08
Notch1Q01705 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Notch1Q01705 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.52■□□□□ 0.08
Notch1Q01705 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Notch1Q01705 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Notch1Q01705 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Notch1Q01705 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Notch1Q01705 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.52■□□□□ 0.07
Notch1Q01705 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.52■□□□□ 0.07
Notch1Q01705 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Notch1Q01705 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.52■□□□□ 0.07
Notch1Q01705 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Notch1Q01705 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Notch1Q01705 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Notch1Q01705 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.51■□□□□ 0.07
Notch1Q01705 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Notch1Q01705 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Notch1Q01705 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Notch1Q01705 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
Notch1Q01705 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Notch1Q01705 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Notch1Q01705 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Notch1Q01705 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Notch1Q01705 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Notch1Q01705 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Notch1Q01705 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Notch1Q01705 Gm7291-201ENSMUST00000199147 382 ntBASIC15.5■□□□□ 0.07
Notch1Q01705 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Notch1Q01705 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Notch1Q01705 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Notch1Q01705 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Notch1Q01705 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Notch1Q01705 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Notch1Q01705 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.5■□□□□ 0.07
Notch1Q01705 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.5■□□□□ 0.07
Notch1Q01705 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Notch1Q01705 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.5■□□□□ 0.07
Notch1Q01705 Gm10849-201ENSMUST00000100397 618 ntBASIC15.49■□□□□ 0.07
Notch1Q01705 Mir7075-201ENSMUST00000184187 82 ntBASIC15.49■□□□□ 0.07
Notch1Q01705 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Notch1Q01705 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Notch1Q01705 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Notch1Q01705 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms