Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Xrn1P97789 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Xrn1P97789 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Xrn1P97789 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
Xrn1P97789 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Xrn1P97789 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Xrn1P97789 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Xrn1P97789 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Xrn1P97789 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Xrn1P97789 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Xrn1P97789 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC31.4■■■□□ 2.62
Xrn1P97789 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
Xrn1P97789 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Xrn1P97789 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Xrn1P97789 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Xrn1P97789 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Xrn1P97789 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
Xrn1P97789 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
Xrn1P97789 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Xrn1P97789 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Xrn1P97789 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Xrn1P97789 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
Xrn1P97789 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC31.36■■■□□ 2.61
Xrn1P97789 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Xrn1P97789 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
Xrn1P97789 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Xrn1P97789 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Xrn1P97789 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC31.35■■■□□ 2.61
Xrn1P97789 Slc35b2-207ENSMUST00000226086 850 ntBASIC31.35■■■□□ 2.61
Xrn1P97789 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Xrn1P97789 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC31.35■■■□□ 2.61
Xrn1P97789 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Xrn1P97789 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Xrn1P97789 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
Xrn1P97789 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Xrn1P97789 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC31.34■■■□□ 2.61
Xrn1P97789 Gm2011-201ENSMUST00000203124 1263 ntBASIC31.34■■■□□ 2.61
Xrn1P97789 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Xrn1P97789 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Xrn1P97789 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC31.34■■■□□ 2.61
Xrn1P97789 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Xrn1P97789 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Xrn1P97789 Gm6934-201ENSMUST00000194780 1905 ntBASIC31.32■■■□□ 2.6
Xrn1P97789 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Xrn1P97789 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Xrn1P97789 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Xrn1P97789 Gm5297-201ENSMUST00000198555 1171 ntBASIC31.31■■■□□ 2.6
Xrn1P97789 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Xrn1P97789 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC31.31■■■□□ 2.6
Xrn1P97789 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Xrn1P97789 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Xrn1P97789 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Xrn1P97789 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC31.3■■■□□ 2.6
Xrn1P97789 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Xrn1P97789 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC31.3■■■□□ 2.6
Xrn1P97789 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Xrn1P97789 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC31.3■■■□□ 2.6
Xrn1P97789 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Xrn1P97789 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Xrn1P97789 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC31.3■■■□□ 2.6
Xrn1P97789 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Xrn1P97789 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Xrn1P97789 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC31.29■■■□□ 2.6
Xrn1P97789 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Xrn1P97789 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Xrn1P97789 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC31.28■■■□□ 2.6
Xrn1P97789 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Xrn1P97789 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Xrn1P97789 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Xrn1P97789 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Xrn1P97789 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Xrn1P97789 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC31.27■■■□□ 2.6
Xrn1P97789 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Xrn1P97789 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC31.27■■■□□ 2.6
Xrn1P97789 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Xrn1P97789 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC31.27■■■□□ 2.6
Xrn1P97789 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Xrn1P97789 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC31.26■■■□□ 2.59
Xrn1P97789 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC31.26■■■□□ 2.59
Xrn1P97789 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Xrn1P97789 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Xrn1P97789 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Xrn1P97789 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Xrn1P97789 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC31.25■■■□□ 2.59
Xrn1P97789 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Xrn1P97789 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Xrn1P97789 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Xrn1P97789 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Xrn1P97789 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
Xrn1P97789 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Xrn1P97789 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Xrn1P97789 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC31.22■■■□□ 2.59
Xrn1P97789 Gm18284-201ENSMUST00000172604 624 ntBASIC31.22■■■□□ 2.59
Xrn1P97789 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Xrn1P97789 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
Xrn1P97789 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Xrn1P97789 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
Xrn1P97789 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Xrn1P97789 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
Xrn1P97789 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms